Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18430 | 55513;55514;55515 | chr2:178601896;178601895;178601894 | chr2:179466623;179466622;179466621 |
N2AB | 16789 | 50590;50591;50592 | chr2:178601896;178601895;178601894 | chr2:179466623;179466622;179466621 |
N2A | 15862 | 47809;47810;47811 | chr2:178601896;178601895;178601894 | chr2:179466623;179466622;179466621 |
N2B | 9365 | 28318;28319;28320 | chr2:178601896;178601895;178601894 | chr2:179466623;179466622;179466621 |
Novex-1 | 9490 | 28693;28694;28695 | chr2:178601896;178601895;178601894 | chr2:179466623;179466622;179466621 |
Novex-2 | 9557 | 28894;28895;28896 | chr2:178601896;178601895;178601894 | chr2:179466623;179466622;179466621 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs970752412 | -1.13 | 0.993 | N | 0.48 | 0.315 | 0.321672782286 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
P/S | rs970752412 | -1.13 | 0.993 | N | 0.48 | 0.315 | 0.321672782286 | gnomAD-4.0.0 | 1.37005E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5206 | ambiguous | 0.5382 | ambiguous | -2.449 | Highly Destabilizing | 0.98 | D | 0.464 | neutral | N | 0.488451034 | None | None | N |
P/C | 0.9367 | likely_pathogenic | 0.9371 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
P/D | 0.9512 | likely_pathogenic | 0.9631 | pathogenic | -3.54 | Highly Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
P/E | 0.9037 | likely_pathogenic | 0.9305 | pathogenic | -3.269 | Highly Destabilizing | 0.999 | D | 0.512 | neutral | None | None | None | None | N |
P/F | 0.9508 | likely_pathogenic | 0.9546 | pathogenic | -1.484 | Destabilizing | 0.191 | N | 0.449 | neutral | None | None | None | None | N |
P/G | 0.8805 | likely_pathogenic | 0.9004 | pathogenic | -3.018 | Highly Destabilizing | 0.995 | D | 0.523 | neutral | None | None | None | None | N |
P/H | 0.8475 | likely_pathogenic | 0.8872 | pathogenic | -2.889 | Highly Destabilizing | 1.0 | D | 0.609 | neutral | N | 0.496555336 | None | None | N |
P/I | 0.8492 | likely_pathogenic | 0.8353 | pathogenic | -0.807 | Destabilizing | 0.942 | D | 0.542 | neutral | None | None | None | None | N |
P/K | 0.9374 | likely_pathogenic | 0.956 | pathogenic | -2.155 | Highly Destabilizing | 0.999 | D | 0.508 | neutral | None | None | None | None | N |
P/L | 0.5359 | ambiguous | 0.5319 | ambiguous | -0.807 | Destabilizing | 0.071 | N | 0.424 | neutral | N | 0.508076226 | None | None | N |
P/M | 0.8432 | likely_pathogenic | 0.8488 | pathogenic | -0.882 | Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
P/N | 0.9389 | likely_pathogenic | 0.9563 | pathogenic | -2.685 | Highly Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
P/Q | 0.8448 | likely_pathogenic | 0.8922 | pathogenic | -2.44 | Highly Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
P/R | 0.8862 | likely_pathogenic | 0.9145 | pathogenic | -2.047 | Highly Destabilizing | 0.998 | D | 0.607 | neutral | N | 0.489211502 | None | None | N |
P/S | 0.751 | likely_pathogenic | 0.8049 | pathogenic | -3.217 | Highly Destabilizing | 0.993 | D | 0.48 | neutral | N | 0.515660288 | None | None | N |
P/T | 0.6318 | likely_pathogenic | 0.6904 | pathogenic | -2.803 | Highly Destabilizing | 0.98 | D | 0.473 | neutral | D | 0.525341351 | None | None | N |
P/V | 0.744 | likely_pathogenic | 0.7248 | pathogenic | -1.334 | Destabilizing | 0.942 | D | 0.513 | neutral | None | None | None | None | N |
P/W | 0.9787 | likely_pathogenic | 0.9842 | pathogenic | -2.136 | Highly Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
P/Y | 0.9645 | likely_pathogenic | 0.97 | pathogenic | -1.793 | Destabilizing | 0.983 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.