Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18433 | 55522;55523;55524 | chr2:178601887;178601886;178601885 | chr2:179466614;179466613;179466612 |
N2AB | 16792 | 50599;50600;50601 | chr2:178601887;178601886;178601885 | chr2:179466614;179466613;179466612 |
N2A | 15865 | 47818;47819;47820 | chr2:178601887;178601886;178601885 | chr2:179466614;179466613;179466612 |
N2B | 9368 | 28327;28328;28329 | chr2:178601887;178601886;178601885 | chr2:179466614;179466613;179466612 |
Novex-1 | 9493 | 28702;28703;28704 | chr2:178601887;178601886;178601885 | chr2:179466614;179466613;179466612 |
Novex-2 | 9560 | 28903;28904;28905 | chr2:178601887;178601886;178601885 | chr2:179466614;179466613;179466612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs2053557019 | None | 0.811 | N | 0.533 | 0.216 | 0.222439326576 | gnomAD-4.0.0 | 1.59686E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86462E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4365 | ambiguous | 0.3646 | ambiguous | -1.125 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
A/D | 0.9432 | likely_pathogenic | 0.9474 | pathogenic | -2.303 | Highly Destabilizing | 0.976 | D | 0.752 | deleterious | None | None | None | None | N |
A/E | 0.935 | likely_pathogenic | 0.9387 | pathogenic | -2.225 | Highly Destabilizing | 0.896 | D | 0.662 | neutral | D | 0.529133805 | None | None | N |
A/F | 0.7912 | likely_pathogenic | 0.7612 | pathogenic | -1.081 | Destabilizing | 0.996 | D | 0.793 | deleterious | None | None | None | None | N |
A/G | 0.2186 | likely_benign | 0.2032 | benign | -1.633 | Destabilizing | 0.811 | D | 0.556 | neutral | N | 0.50975861 | None | None | N |
A/H | 0.9316 | likely_pathogenic | 0.9286 | pathogenic | -2.057 | Highly Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
A/I | 0.5293 | ambiguous | 0.4949 | ambiguous | -0.348 | Destabilizing | 0.988 | D | 0.754 | deleterious | None | None | None | None | N |
A/K | 0.9747 | likely_pathogenic | 0.9748 | pathogenic | -1.863 | Destabilizing | 0.132 | N | 0.409 | neutral | None | None | None | None | N |
A/L | 0.5269 | ambiguous | 0.5065 | ambiguous | -0.348 | Destabilizing | 0.919 | D | 0.651 | neutral | None | None | None | None | N |
A/M | 0.5773 | likely_pathogenic | 0.5325 | ambiguous | -0.213 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
A/N | 0.8939 | likely_pathogenic | 0.8914 | pathogenic | -1.772 | Destabilizing | 0.976 | D | 0.757 | deleterious | None | None | None | None | N |
A/P | 0.9513 | likely_pathogenic | 0.9555 | pathogenic | -0.612 | Destabilizing | 0.984 | D | 0.737 | prob.delet. | N | 0.51826345 | None | None | N |
A/Q | 0.9095 | likely_pathogenic | 0.9059 | pathogenic | -1.776 | Destabilizing | 0.976 | D | 0.754 | deleterious | None | None | None | None | N |
A/R | 0.9503 | likely_pathogenic | 0.9525 | pathogenic | -1.587 | Destabilizing | 0.952 | D | 0.73 | prob.delet. | None | None | None | None | N |
A/S | 0.1403 | likely_benign | 0.1158 | benign | -2.084 | Highly Destabilizing | 0.103 | N | 0.355 | neutral | N | 0.439186591 | None | None | N |
A/T | 0.181 | likely_benign | 0.1742 | benign | -1.911 | Destabilizing | 0.811 | D | 0.533 | neutral | N | 0.503659357 | None | None | N |
A/V | 0.2657 | likely_benign | 0.2579 | benign | -0.612 | Destabilizing | 0.896 | D | 0.569 | neutral | N | 0.465138254 | None | None | N |
A/W | 0.9564 | likely_pathogenic | 0.946 | pathogenic | -1.704 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
A/Y | 0.8761 | likely_pathogenic | 0.8584 | pathogenic | -1.247 | Destabilizing | 0.996 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.