Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18436 | 55531;55532;55533 | chr2:178601784;178601783;178601782 | chr2:179466511;179466510;179466509 |
N2AB | 16795 | 50608;50609;50610 | chr2:178601784;178601783;178601782 | chr2:179466511;179466510;179466509 |
N2A | 15868 | 47827;47828;47829 | chr2:178601784;178601783;178601782 | chr2:179466511;179466510;179466509 |
N2B | 9371 | 28336;28337;28338 | chr2:178601784;178601783;178601782 | chr2:179466511;179466510;179466509 |
Novex-1 | 9496 | 28711;28712;28713 | chr2:178601784;178601783;178601782 | chr2:179466511;179466510;179466509 |
Novex-2 | 9563 | 28912;28913;28914 | chr2:178601784;178601783;178601782 | chr2:179466511;179466510;179466509 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs201510986 | 0.837 | 0.834 | N | 0.613 | 0.247 | None | gnomAD-2.1.1 | 3.32E-05 | None | None | None | None | N | None | 3.74657E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs201510986 | 0.837 | 0.834 | N | 0.613 | 0.247 | None | gnomAD-3.1.2 | 1.71199E-04 | None | None | None | None | N | None | 6.04127E-04 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs201510986 | 0.837 | 0.834 | N | 0.613 | 0.247 | None | gnomAD-4.0.0 | 2.49524E-05 | None | None | None | None | N | None | 4.71609E-04 | 3.42489E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.84183E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2156 | likely_benign | 0.2592 | benign | -0.629 | Destabilizing | 0.834 | D | 0.679 | prob.neutral | N | 0.490149781 | None | None | N |
E/C | 0.8411 | likely_pathogenic | 0.8767 | pathogenic | -0.182 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/D | 0.1596 | likely_benign | 0.1893 | benign | -0.484 | Destabilizing | 0.016 | N | 0.237 | neutral | N | 0.503832715 | None | None | N |
E/F | 0.72 | likely_pathogenic | 0.7486 | pathogenic | -0.267 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/G | 0.2878 | likely_benign | 0.3799 | ambiguous | -0.878 | Destabilizing | 0.946 | D | 0.677 | prob.neutral | N | 0.498507574 | None | None | N |
E/H | 0.4219 | ambiguous | 0.4783 | ambiguous | -0.142 | Destabilizing | 0.998 | D | 0.659 | neutral | None | None | None | None | N |
E/I | 0.3098 | likely_benign | 0.3283 | benign | 0.013 | Stabilizing | 0.979 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/K | 0.1971 | likely_benign | 0.263 | benign | 0.216 | Stabilizing | 0.834 | D | 0.613 | neutral | N | 0.506120872 | None | None | N |
E/L | 0.3767 | ambiguous | 0.4083 | ambiguous | 0.013 | Stabilizing | 0.979 | D | 0.746 | deleterious | None | None | None | None | N |
E/M | 0.4445 | ambiguous | 0.473 | ambiguous | 0.193 | Stabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/N | 0.3045 | likely_benign | 0.3731 | ambiguous | -0.298 | Destabilizing | 0.921 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/P | 0.9125 | likely_pathogenic | 0.9579 | pathogenic | -0.181 | Destabilizing | 0.979 | D | 0.76 | deleterious | None | None | None | None | N |
E/Q | 0.1302 | likely_benign | 0.1537 | benign | -0.23 | Destabilizing | 0.946 | D | 0.637 | neutral | D | 0.526362858 | None | None | N |
E/R | 0.3276 | likely_benign | 0.4115 | ambiguous | 0.453 | Stabilizing | 0.979 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/S | 0.2492 | likely_benign | 0.3011 | benign | -0.462 | Destabilizing | 0.769 | D | 0.633 | neutral | None | None | None | None | N |
E/T | 0.2275 | likely_benign | 0.273 | benign | -0.247 | Destabilizing | 0.959 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/V | 0.1875 | likely_benign | 0.209 | benign | -0.181 | Destabilizing | 0.973 | D | 0.743 | deleterious | N | 0.48613731 | None | None | N |
E/W | 0.8974 | likely_pathogenic | 0.9177 | pathogenic | -0.002 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/Y | 0.624 | likely_pathogenic | 0.6621 | pathogenic | 0.007 | Stabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.