Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18438 | 55537;55538;55539 | chr2:178601778;178601777;178601776 | chr2:179466505;179466504;179466503 |
N2AB | 16797 | 50614;50615;50616 | chr2:178601778;178601777;178601776 | chr2:179466505;179466504;179466503 |
N2A | 15870 | 47833;47834;47835 | chr2:178601778;178601777;178601776 | chr2:179466505;179466504;179466503 |
N2B | 9373 | 28342;28343;28344 | chr2:178601778;178601777;178601776 | chr2:179466505;179466504;179466503 |
Novex-1 | 9498 | 28717;28718;28719 | chr2:178601778;178601777;178601776 | chr2:179466505;179466504;179466503 |
Novex-2 | 9565 | 28918;28919;28920 | chr2:178601778;178601777;178601776 | chr2:179466505;179466504;179466503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1416049620 | None | 0.007 | N | 0.142 | 0.135 | 0.195762928549 | gnomAD-4.0.0 | 1.62326E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.50267E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3351 | likely_benign | 0.4132 | ambiguous | -0.689 | Destabilizing | 0.998 | D | 0.465 | neutral | None | None | None | None | N |
A/D | 0.1649 | likely_benign | 0.235 | benign | -0.29 | Destabilizing | 0.801 | D | 0.385 | neutral | N | 0.448035361 | None | None | N |
A/E | 0.173 | likely_benign | 0.2313 | benign | -0.45 | Destabilizing | 0.842 | D | 0.398 | neutral | None | None | None | None | N |
A/F | 0.2441 | likely_benign | 0.328 | benign | -0.818 | Destabilizing | 0.974 | D | 0.476 | neutral | None | None | None | None | N |
A/G | 0.0969 | likely_benign | 0.1161 | benign | -0.11 | Destabilizing | 0.625 | D | 0.415 | neutral | N | 0.433068695 | None | None | N |
A/H | 0.2854 | likely_benign | 0.3786 | ambiguous | -0.185 | Destabilizing | 0.998 | D | 0.472 | neutral | None | None | None | None | N |
A/I | 0.1856 | likely_benign | 0.2411 | benign | -0.264 | Destabilizing | 0.842 | D | 0.376 | neutral | None | None | None | None | N |
A/K | 0.2104 | likely_benign | 0.3252 | benign | -0.367 | Destabilizing | 0.842 | D | 0.397 | neutral | None | None | None | None | N |
A/L | 0.1231 | likely_benign | 0.158 | benign | -0.264 | Destabilizing | 0.525 | D | 0.385 | neutral | None | None | None | None | N |
A/M | 0.1529 | likely_benign | 0.185 | benign | -0.315 | Destabilizing | 0.991 | D | 0.453 | neutral | None | None | None | None | N |
A/N | 0.1308 | likely_benign | 0.1782 | benign | -0.078 | Destabilizing | 0.949 | D | 0.417 | neutral | None | None | None | None | N |
A/P | 0.3725 | ambiguous | 0.566 | pathogenic | -0.18 | Destabilizing | 0.966 | D | 0.387 | neutral | N | 0.4834388 | None | None | N |
A/Q | 0.2081 | likely_benign | 0.2738 | benign | -0.352 | Destabilizing | 0.974 | D | 0.435 | neutral | None | None | None | None | N |
A/R | 0.2106 | likely_benign | 0.3134 | benign | 0.036 | Stabilizing | 0.949 | D | 0.398 | neutral | None | None | None | None | N |
A/S | 0.0681 | likely_benign | 0.0759 | benign | -0.27 | Destabilizing | 0.454 | N | 0.417 | neutral | N | 0.393086155 | None | None | N |
A/T | 0.0646 | likely_benign | 0.0709 | benign | -0.353 | Destabilizing | 0.007 | N | 0.142 | neutral | N | 0.367323706 | None | None | N |
A/V | 0.1023 | likely_benign | 0.1242 | benign | -0.18 | Destabilizing | 0.454 | N | 0.421 | neutral | N | 0.442341539 | None | None | N |
A/W | 0.5609 | ambiguous | 0.6902 | pathogenic | -0.945 | Destabilizing | 0.998 | D | 0.53 | neutral | None | None | None | None | N |
A/Y | 0.3529 | ambiguous | 0.4503 | ambiguous | -0.587 | Destabilizing | 0.991 | D | 0.47 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.