Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18439 | 55540;55541;55542 | chr2:178601775;178601774;178601773 | chr2:179466502;179466501;179466500 |
N2AB | 16798 | 50617;50618;50619 | chr2:178601775;178601774;178601773 | chr2:179466502;179466501;179466500 |
N2A | 15871 | 47836;47837;47838 | chr2:178601775;178601774;178601773 | chr2:179466502;179466501;179466500 |
N2B | 9374 | 28345;28346;28347 | chr2:178601775;178601774;178601773 | chr2:179466502;179466501;179466500 |
Novex-1 | 9499 | 28720;28721;28722 | chr2:178601775;178601774;178601773 | chr2:179466502;179466501;179466500 |
Novex-2 | 9566 | 28921;28922;28923 | chr2:178601775;178601774;178601773 | chr2:179466502;179466501;179466500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.001 | N | 0.114 | 0.037 | 0.292787519742 | gnomAD-4.0.0 | 1.37737E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.06175E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/G | None | None | 0.549 | N | 0.242 | 0.199 | 0.394230963961 | gnomAD-4.0.0 | 1.61583E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88424E-06 | 0 | 0 |
E/K | rs866683190 | 0.799 | 0.004 | N | 0.145 | 0.208 | 0.342865806769 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.21E-06 | 0 |
E/K | rs866683190 | 0.799 | 0.004 | N | 0.145 | 0.208 | 0.342865806769 | gnomAD-4.0.0 | 4.14132E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.0556E-03 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1145 | likely_benign | 0.1416 | benign | 0.033 | Stabilizing | 0.201 | N | 0.263 | neutral | N | 0.493618509 | None | None | N |
E/C | 0.7746 | likely_pathogenic | 0.8659 | pathogenic | 0.017 | Stabilizing | 0.992 | D | 0.232 | neutral | None | None | None | None | N |
E/D | 0.0941 | likely_benign | 0.1128 | benign | -0.273 | Destabilizing | 0.001 | N | 0.114 | neutral | N | 0.3931663 | None | None | N |
E/F | 0.7065 | likely_pathogenic | 0.8053 | pathogenic | -0.119 | Destabilizing | 0.972 | D | 0.205 | neutral | None | None | None | None | N |
E/G | 0.102 | likely_benign | 0.1508 | benign | -0.065 | Destabilizing | 0.549 | D | 0.242 | neutral | N | 0.466893267 | None | None | N |
E/H | 0.4345 | ambiguous | 0.5539 | ambiguous | 0.399 | Stabilizing | 0.92 | D | 0.219 | neutral | None | None | None | None | N |
E/I | 0.3204 | likely_benign | 0.4024 | ambiguous | 0.227 | Stabilizing | 0.92 | D | 0.238 | neutral | None | None | None | None | N |
E/K | 0.1173 | likely_benign | 0.1813 | benign | 0.512 | Stabilizing | 0.004 | N | 0.145 | neutral | N | 0.488770049 | None | None | N |
E/L | 0.3684 | ambiguous | 0.456 | ambiguous | 0.227 | Stabilizing | 0.617 | D | 0.272 | neutral | None | None | None | None | N |
E/M | 0.4499 | ambiguous | 0.5321 | ambiguous | 0.098 | Stabilizing | 0.992 | D | 0.2 | neutral | None | None | None | None | N |
E/N | 0.201 | likely_benign | 0.2633 | benign | 0.387 | Stabilizing | 0.447 | N | 0.187 | neutral | None | None | None | None | N |
E/P | 0.2594 | likely_benign | 0.3382 | benign | 0.18 | Stabilizing | 0.766 | D | 0.273 | neutral | None | None | None | None | N |
E/Q | 0.1428 | likely_benign | 0.1799 | benign | 0.374 | Stabilizing | 0.379 | N | 0.21 | neutral | D | 0.537332 | None | None | N |
E/R | 0.223 | likely_benign | 0.3316 | benign | 0.645 | Stabilizing | 0.447 | N | 0.251 | neutral | None | None | None | None | N |
E/S | 0.1509 | likely_benign | 0.1906 | benign | 0.239 | Stabilizing | 0.25 | N | 0.219 | neutral | None | None | None | None | N |
E/T | 0.1866 | likely_benign | 0.2483 | benign | 0.323 | Stabilizing | 0.617 | D | 0.257 | neutral | None | None | None | None | N |
E/V | 0.1981 | likely_benign | 0.2637 | benign | 0.18 | Stabilizing | 0.549 | D | 0.263 | neutral | N | 0.519517031 | None | None | N |
E/W | 0.84 | likely_pathogenic | 0.9181 | pathogenic | -0.114 | Destabilizing | 0.992 | D | 0.345 | neutral | None | None | None | None | N |
E/Y | 0.556 | ambiguous | 0.6872 | pathogenic | 0.099 | Stabilizing | 0.972 | D | 0.205 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.