Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18440 | 55543;55544;55545 | chr2:178601772;178601771;178601770 | chr2:179466499;179466498;179466497 |
N2AB | 16799 | 50620;50621;50622 | chr2:178601772;178601771;178601770 | chr2:179466499;179466498;179466497 |
N2A | 15872 | 47839;47840;47841 | chr2:178601772;178601771;178601770 | chr2:179466499;179466498;179466497 |
N2B | 9375 | 28348;28349;28350 | chr2:178601772;178601771;178601770 | chr2:179466499;179466498;179466497 |
Novex-1 | 9500 | 28723;28724;28725 | chr2:178601772;178601771;178601770 | chr2:179466499;179466498;179466497 |
Novex-2 | 9567 | 28924;28925;28926 | chr2:178601772;178601771;178601770 | chr2:179466499;179466498;179466497 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs911563094 | None | 0.101 | N | 0.261 | 0.076 | 0.159798565429 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs911563094 | None | 0.101 | N | 0.261 | 0.076 | 0.159798565429 | gnomAD-4.0.0 | 2.4939E-06 | None | None | None | None | N | None | 1.3464E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54973E-06 | 0 | 0 |
N/S | rs747117847 | -0.682 | 0.047 | N | 0.209 | 0.103 | 0.184867976434 | gnomAD-2.1.1 | 4.2E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.17E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2164 | likely_benign | 0.356 | ambiguous | -0.416 | Destabilizing | 0.061 | N | 0.434 | neutral | None | None | None | None | N |
N/C | 0.3079 | likely_benign | 0.4404 | ambiguous | 0.321 | Stabilizing | 0.983 | D | 0.505 | neutral | None | None | None | None | N |
N/D | 0.1276 | likely_benign | 0.2109 | benign | 0.125 | Stabilizing | 0.101 | N | 0.282 | neutral | N | 0.420350114 | None | None | N |
N/E | 0.339 | likely_benign | 0.5141 | ambiguous | 0.113 | Stabilizing | 0.001 | N | 0.102 | neutral | None | None | None | None | N |
N/F | 0.4575 | ambiguous | 0.5618 | ambiguous | -0.622 | Destabilizing | 0.836 | D | 0.535 | neutral | None | None | None | None | N |
N/G | 0.2227 | likely_benign | 0.3356 | benign | -0.631 | Destabilizing | 0.001 | N | 0.107 | neutral | None | None | None | None | N |
N/H | 0.1233 | likely_benign | 0.1699 | benign | -0.605 | Destabilizing | 0.794 | D | 0.407 | neutral | N | 0.485652386 | None | None | N |
N/I | 0.2258 | likely_benign | 0.3216 | benign | 0.072 | Stabilizing | 0.351 | N | 0.517 | neutral | N | 0.478014338 | None | None | N |
N/K | 0.2375 | likely_benign | 0.4034 | ambiguous | 0.009 | Stabilizing | 0.101 | N | 0.261 | neutral | N | 0.448902152 | None | None | N |
N/L | 0.2668 | likely_benign | 0.379 | ambiguous | 0.072 | Stabilizing | 0.129 | N | 0.502 | neutral | None | None | None | None | N |
N/M | 0.2853 | likely_benign | 0.3952 | ambiguous | 0.415 | Stabilizing | 0.94 | D | 0.498 | neutral | None | None | None | None | N |
N/P | 0.6953 | likely_pathogenic | 0.8453 | pathogenic | -0.063 | Destabilizing | 0.593 | D | 0.512 | neutral | None | None | None | None | N |
N/Q | 0.2935 | likely_benign | 0.4364 | ambiguous | -0.429 | Destabilizing | 0.264 | N | 0.29 | neutral | None | None | None | None | N |
N/R | 0.3259 | likely_benign | 0.4993 | ambiguous | 0.036 | Stabilizing | 0.418 | N | 0.258 | neutral | None | None | None | None | N |
N/S | 0.0983 | likely_benign | 0.1438 | benign | -0.262 | Destabilizing | 0.047 | N | 0.209 | neutral | N | 0.442610898 | None | None | N |
N/T | 0.1119 | likely_benign | 0.17 | benign | -0.118 | Destabilizing | 0.001 | N | 0.122 | neutral | N | 0.38681633 | None | None | N |
N/V | 0.2503 | likely_benign | 0.3643 | ambiguous | -0.063 | Destabilizing | 0.129 | N | 0.498 | neutral | None | None | None | None | N |
N/W | 0.7098 | likely_pathogenic | 0.8226 | pathogenic | -0.546 | Destabilizing | 0.983 | D | 0.513 | neutral | None | None | None | None | N |
N/Y | 0.147 | likely_benign | 0.1742 | benign | -0.31 | Destabilizing | 0.921 | D | 0.51 | neutral | N | 0.450635736 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.