Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18448 | 55567;55568;55569 | chr2:178601748;178601747;178601746 | chr2:179466475;179466474;179466473 |
N2AB | 16807 | 50644;50645;50646 | chr2:178601748;178601747;178601746 | chr2:179466475;179466474;179466473 |
N2A | 15880 | 47863;47864;47865 | chr2:178601748;178601747;178601746 | chr2:179466475;179466474;179466473 |
N2B | 9383 | 28372;28373;28374 | chr2:178601748;178601747;178601746 | chr2:179466475;179466474;179466473 |
Novex-1 | 9508 | 28747;28748;28749 | chr2:178601748;178601747;178601746 | chr2:179466475;179466474;179466473 |
Novex-2 | 9575 | 28948;28949;28950 | chr2:178601748;178601747;178601746 | chr2:179466475;179466474;179466473 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1297622212 | -0.442 | 0.09 | N | 0.341 | 0.086 | 0.203808441222 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 6.51E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs1297622212 | -0.442 | 0.09 | N | 0.341 | 0.086 | 0.203808441222 | gnomAD-4.0.0 | 1.37305E-06 | None | None | None | None | N | None | 3.01896E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00679E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1086 | likely_benign | 0.0943 | benign | -0.462 | Destabilizing | 0.09 | N | 0.341 | neutral | N | 0.470119134 | None | None | N |
E/C | 0.6901 | likely_pathogenic | 0.5949 | pathogenic | -0.036 | Destabilizing | 0.981 | D | 0.431 | neutral | None | None | None | None | N |
E/D | 0.088 | likely_benign | 0.0801 | benign | -0.379 | Destabilizing | 0.001 | N | 0.107 | neutral | N | 0.408606528 | None | None | N |
E/F | 0.5221 | ambiguous | 0.4545 | ambiguous | -0.39 | Destabilizing | 0.818 | D | 0.434 | neutral | None | None | None | None | N |
E/G | 0.1529 | likely_benign | 0.1276 | benign | -0.672 | Destabilizing | 0.193 | N | 0.369 | neutral | N | 0.469599059 | None | None | N |
E/H | 0.2954 | likely_benign | 0.2408 | benign | -0.283 | Destabilizing | 0.818 | D | 0.383 | neutral | None | None | None | None | N |
E/I | 0.2102 | likely_benign | 0.1765 | benign | 0.058 | Stabilizing | 0.241 | N | 0.417 | neutral | None | None | None | None | N |
E/K | 0.1377 | likely_benign | 0.1193 | benign | 0.164 | Stabilizing | 0.324 | N | 0.267 | neutral | N | 0.423845339 | None | None | N |
E/L | 0.2841 | likely_benign | 0.2175 | benign | 0.058 | Stabilizing | 0.241 | N | 0.409 | neutral | None | None | None | None | N |
E/M | 0.3347 | likely_benign | 0.2773 | benign | 0.253 | Stabilizing | 0.818 | D | 0.393 | neutral | None | None | None | None | N |
E/N | 0.1337 | likely_benign | 0.1042 | benign | -0.08 | Destabilizing | 0.002 | N | 0.237 | neutral | None | None | None | None | N |
E/P | 0.6739 | likely_pathogenic | 0.6101 | pathogenic | -0.095 | Destabilizing | 0.818 | D | 0.416 | neutral | None | None | None | None | N |
E/Q | 0.1128 | likely_benign | 0.0964 | benign | -0.042 | Destabilizing | 0.324 | N | 0.351 | neutral | N | 0.448474425 | None | None | N |
E/R | 0.2156 | likely_benign | 0.1851 | benign | 0.342 | Stabilizing | 0.69 | D | 0.347 | neutral | None | None | None | None | N |
E/S | 0.128 | likely_benign | 0.1037 | benign | -0.271 | Destabilizing | 0.116 | N | 0.264 | neutral | None | None | None | None | N |
E/T | 0.132 | likely_benign | 0.1089 | benign | -0.104 | Destabilizing | 0.008 | N | 0.19 | neutral | None | None | None | None | N |
E/V | 0.129 | likely_benign | 0.1128 | benign | -0.095 | Destabilizing | 0.003 | N | 0.203 | neutral | N | 0.435430557 | None | None | N |
E/W | 0.7997 | likely_pathogenic | 0.7557 | pathogenic | -0.254 | Destabilizing | 0.981 | D | 0.511 | neutral | None | None | None | None | N |
E/Y | 0.3955 | ambiguous | 0.3392 | benign | -0.159 | Destabilizing | 0.932 | D | 0.408 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.