Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18455 | 55588;55589;55590 | chr2:178601727;178601726;178601725 | chr2:179466454;179466453;179466452 |
N2AB | 16814 | 50665;50666;50667 | chr2:178601727;178601726;178601725 | chr2:179466454;179466453;179466452 |
N2A | 15887 | 47884;47885;47886 | chr2:178601727;178601726;178601725 | chr2:179466454;179466453;179466452 |
N2B | 9390 | 28393;28394;28395 | chr2:178601727;178601726;178601725 | chr2:179466454;179466453;179466452 |
Novex-1 | 9515 | 28768;28769;28770 | chr2:178601727;178601726;178601725 | chr2:179466454;179466453;179466452 |
Novex-2 | 9582 | 28969;28970;28971 | chr2:178601727;178601726;178601725 | chr2:179466454;179466453;179466452 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs2154193105 | None | 1.0 | D | 0.75 | 0.757 | 0.803425027574 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/V | rs2154193105 | None | 1.0 | D | 0.75 | 0.757 | 0.803425027574 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47137E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.816 | likely_pathogenic | 0.8017 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | D | 0.574005238 | None | None | I |
G/C | 0.9741 | likely_pathogenic | 0.9718 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | D | 0.602368609 | None | None | I |
G/D | 0.9902 | likely_pathogenic | 0.9882 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.601965001 | None | None | I |
G/E | 0.9945 | likely_pathogenic | 0.9939 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
G/F | 0.9982 | likely_pathogenic | 0.998 | pathogenic | -0.514 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
G/H | 0.9972 | likely_pathogenic | 0.997 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
G/I | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | 0.437 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
G/K | 0.9955 | likely_pathogenic | 0.9957 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
G/L | 0.9958 | likely_pathogenic | 0.9951 | pathogenic | 0.437 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
G/M | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | 0.244 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
G/N | 0.9921 | likely_pathogenic | 0.9896 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
G/P | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
G/Q | 0.9914 | likely_pathogenic | 0.9914 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
G/R | 0.9836 | likely_pathogenic | 0.986 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.602166805 | None | None | I |
G/S | 0.8307 | likely_pathogenic | 0.8172 | pathogenic | -0.971 | Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.585743835 | None | None | I |
G/T | 0.9879 | likely_pathogenic | 0.9858 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
G/V | 0.9942 | likely_pathogenic | 0.9942 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.75 | deleterious | D | 0.602368609 | None | None | I |
G/W | 0.9952 | likely_pathogenic | 0.9955 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
G/Y | 0.9975 | likely_pathogenic | 0.9974 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.