Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18456 | 55591;55592;55593 | chr2:178601724;178601723;178601722 | chr2:179466451;179466450;179466449 |
N2AB | 16815 | 50668;50669;50670 | chr2:178601724;178601723;178601722 | chr2:179466451;179466450;179466449 |
N2A | 15888 | 47887;47888;47889 | chr2:178601724;178601723;178601722 | chr2:179466451;179466450;179466449 |
N2B | 9391 | 28396;28397;28398 | chr2:178601724;178601723;178601722 | chr2:179466451;179466450;179466449 |
Novex-1 | 9516 | 28771;28772;28773 | chr2:178601724;178601723;178601722 | chr2:179466451;179466450;179466449 |
Novex-2 | 9583 | 28972;28973;28974 | chr2:178601724;178601723;178601722 | chr2:179466451;179466450;179466449 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.896 | N | 0.581 | 0.392 | 0.591556180789 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.647 | likely_pathogenic | 0.6706 | pathogenic | -0.797 | Destabilizing | 0.4 | N | 0.514 | neutral | None | None | None | None | N |
K/C | 0.721 | likely_pathogenic | 0.6904 | pathogenic | -0.849 | Destabilizing | 0.992 | D | 0.572 | neutral | None | None | None | None | N |
K/D | 0.848 | likely_pathogenic | 0.8669 | pathogenic | -0.549 | Destabilizing | 0.617 | D | 0.533 | neutral | None | None | None | None | N |
K/E | 0.5395 | ambiguous | 0.5892 | pathogenic | -0.436 | Destabilizing | 0.334 | N | 0.565 | neutral | N | 0.478590341 | None | None | N |
K/F | 0.8076 | likely_pathogenic | 0.8105 | pathogenic | -0.626 | Destabilizing | 0.972 | D | 0.574 | neutral | None | None | None | None | N |
K/G | 0.7747 | likely_pathogenic | 0.7912 | pathogenic | -1.161 | Destabilizing | 0.617 | D | 0.529 | neutral | None | None | None | None | N |
K/H | 0.3717 | ambiguous | 0.3581 | ambiguous | -1.613 | Destabilizing | 0.92 | D | 0.555 | neutral | None | None | None | None | N |
K/I | 0.3727 | ambiguous | 0.4015 | ambiguous | 0.153 | Stabilizing | 0.896 | D | 0.581 | neutral | N | 0.474147313 | None | None | N |
K/L | 0.4744 | ambiguous | 0.4939 | ambiguous | 0.153 | Stabilizing | 0.617 | D | 0.529 | neutral | None | None | None | None | N |
K/M | 0.3339 | likely_benign | 0.3627 | ambiguous | 0.202 | Stabilizing | 0.972 | D | 0.547 | neutral | None | None | None | None | N |
K/N | 0.6417 | likely_pathogenic | 0.6605 | pathogenic | -0.702 | Destabilizing | 0.549 | D | 0.505 | neutral | N | 0.496504098 | None | None | N |
K/P | 0.9239 | likely_pathogenic | 0.9406 | pathogenic | -0.134 | Destabilizing | 0.92 | D | 0.554 | neutral | None | None | None | None | N |
K/Q | 0.2487 | likely_benign | 0.2619 | benign | -0.832 | Destabilizing | 0.549 | D | 0.544 | neutral | N | 0.518879526 | None | None | N |
K/R | 0.0816 | likely_benign | 0.0819 | benign | -0.736 | Destabilizing | 0.001 | N | 0.135 | neutral | N | 0.424142568 | None | None | N |
K/S | 0.6935 | likely_pathogenic | 0.7016 | pathogenic | -1.367 | Destabilizing | 0.617 | D | 0.528 | neutral | None | None | None | None | N |
K/T | 0.3113 | likely_benign | 0.3273 | benign | -1.044 | Destabilizing | 0.549 | D | 0.513 | neutral | N | 0.477571621 | None | None | N |
K/V | 0.39 | ambiguous | 0.4108 | ambiguous | -0.134 | Destabilizing | 0.85 | D | 0.541 | neutral | None | None | None | None | N |
K/W | 0.7601 | likely_pathogenic | 0.7328 | pathogenic | -0.494 | Destabilizing | 0.992 | D | 0.603 | neutral | None | None | None | None | N |
K/Y | 0.6527 | likely_pathogenic | 0.6557 | pathogenic | -0.159 | Destabilizing | 0.972 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.