Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18457 | 55594;55595;55596 | chr2:178601721;178601720;178601719 | chr2:179466448;179466447;179466446 |
N2AB | 16816 | 50671;50672;50673 | chr2:178601721;178601720;178601719 | chr2:179466448;179466447;179466446 |
N2A | 15889 | 47890;47891;47892 | chr2:178601721;178601720;178601719 | chr2:179466448;179466447;179466446 |
N2B | 9392 | 28399;28400;28401 | chr2:178601721;178601720;178601719 | chr2:179466448;179466447;179466446 |
Novex-1 | 9517 | 28774;28775;28776 | chr2:178601721;178601720;178601719 | chr2:179466448;179466447;179466446 |
Novex-2 | 9584 | 28975;28976;28977 | chr2:178601721;178601720;178601719 | chr2:179466448;179466447;179466446 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.846 | 0.854 | 0.7991872175 | gnomAD-4.0.0 | 2.74262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60081E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -2.072 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/C | 0.9875 | likely_pathogenic | 0.9906 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.605597477 | None | None | N |
Y/D | 0.9989 | likely_pathogenic | 0.9994 | pathogenic | -2.917 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.605597477 | None | None | N |
Y/E | 0.9996 | likely_pathogenic | 0.9998 | pathogenic | -2.671 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Y/F | 0.2474 | likely_benign | 0.2207 | benign | -0.656 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | D | 0.565999122 | None | None | N |
Y/G | 0.9967 | likely_pathogenic | 0.9979 | pathogenic | -2.514 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/H | 0.9922 | likely_pathogenic | 0.9945 | pathogenic | -1.993 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.605395673 | None | None | N |
Y/I | 0.9573 | likely_pathogenic | 0.9589 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Y/K | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/L | 0.9281 | likely_pathogenic | 0.9253 | pathogenic | -0.607 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
Y/M | 0.9871 | likely_pathogenic | 0.9864 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/N | 0.9956 | likely_pathogenic | 0.9975 | pathogenic | -2.521 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.605597477 | None | None | N |
Y/P | 0.9994 | likely_pathogenic | 0.9997 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
Y/Q | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -2.072 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Y/R | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -1.943 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Y/S | 0.998 | likely_pathogenic | 0.9988 | pathogenic | -2.748 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.605597477 | None | None | N |
Y/T | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -2.353 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Y/V | 0.9633 | likely_pathogenic | 0.9681 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Y/W | 0.8356 | likely_pathogenic | 0.8339 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.