Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18459 | 55600;55601;55602 | chr2:178601715;178601714;178601713 | chr2:179466442;179466441;179466440 |
N2AB | 16818 | 50677;50678;50679 | chr2:178601715;178601714;178601713 | chr2:179466442;179466441;179466440 |
N2A | 15891 | 47896;47897;47898 | chr2:178601715;178601714;178601713 | chr2:179466442;179466441;179466440 |
N2B | 9394 | 28405;28406;28407 | chr2:178601715;178601714;178601713 | chr2:179466442;179466441;179466440 |
Novex-1 | 9519 | 28780;28781;28782 | chr2:178601715;178601714;178601713 | chr2:179466442;179466441;179466440 |
Novex-2 | 9586 | 28981;28982;28983 | chr2:178601715;178601714;178601713 | chr2:179466442;179466441;179466440 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 1.0 | N | 0.875 | 0.562 | 0.733087090833 | gnomAD-4.0.0 | 3.19958E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7326E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9553 | likely_pathogenic | 0.9614 | pathogenic | -2.044 | Highly Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/C | 0.9607 | likely_pathogenic | 0.965 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
I/D | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -2.113 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
I/E | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -2.026 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
I/F | 0.5859 | likely_pathogenic | 0.6544 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.832 | deleterious | N | 0.477999878 | None | None | N |
I/G | 0.9947 | likely_pathogenic | 0.9958 | pathogenic | -2.435 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
I/H | 0.9956 | likely_pathogenic | 0.9968 | pathogenic | -1.787 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/K | 0.9926 | likely_pathogenic | 0.9945 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/L | 0.2033 | likely_benign | 0.2119 | benign | -0.98 | Destabilizing | 0.993 | D | 0.472 | neutral | N | 0.462441013 | None | None | N |
I/M | 0.3041 | likely_benign | 0.3129 | benign | -1.058 | Destabilizing | 1.0 | D | 0.776 | deleterious | N | 0.467657531 | None | None | N |
I/N | 0.9899 | likely_pathogenic | 0.9923 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.479520815 | None | None | N |
I/P | 0.9981 | likely_pathogenic | 0.9985 | pathogenic | -1.31 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
I/Q | 0.9928 | likely_pathogenic | 0.9945 | pathogenic | -1.589 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
I/R | 0.9881 | likely_pathogenic | 0.9912 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
I/S | 0.987 | likely_pathogenic | 0.9893 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.479267326 | None | None | N |
I/T | 0.9766 | likely_pathogenic | 0.9799 | pathogenic | -1.954 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.479013836 | None | None | N |
I/V | 0.1273 | likely_benign | 0.1273 | benign | -1.31 | Destabilizing | 0.993 | D | 0.433 | neutral | N | 0.449973148 | None | None | N |
I/W | 0.9917 | likely_pathogenic | 0.9937 | pathogenic | -1.755 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/Y | 0.9683 | likely_pathogenic | 0.9766 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.