Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18467 | 55624;55625;55626 | chr2:178601691;178601690;178601689 | chr2:179466418;179466417;179466416 |
N2AB | 16826 | 50701;50702;50703 | chr2:178601691;178601690;178601689 | chr2:179466418;179466417;179466416 |
N2A | 15899 | 47920;47921;47922 | chr2:178601691;178601690;178601689 | chr2:179466418;179466417;179466416 |
N2B | 9402 | 28429;28430;28431 | chr2:178601691;178601690;178601689 | chr2:179466418;179466417;179466416 |
Novex-1 | 9527 | 28804;28805;28806 | chr2:178601691;178601690;178601689 | chr2:179466418;179466417;179466416 |
Novex-2 | 9594 | 29005;29006;29007 | chr2:178601691;178601690;178601689 | chr2:179466418;179466417;179466416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.997 | N | 0.519 | 0.355 | 0.296329037015 | gnomAD-4.0.0 | 1.60775E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87297E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2679 | likely_benign | 0.285 | benign | -0.271 | Destabilizing | 0.997 | D | 0.528 | neutral | None | None | None | None | I |
Q/C | 0.5795 | likely_pathogenic | 0.6306 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
Q/D | 0.5779 | likely_pathogenic | 0.6404 | pathogenic | -0.06 | Destabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | I |
Q/E | 0.1052 | likely_benign | 0.107 | benign | -0.097 | Destabilizing | 0.992 | D | 0.424 | neutral | N | 0.452998463 | None | None | I |
Q/F | 0.647 | likely_pathogenic | 0.6981 | pathogenic | -0.498 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | I |
Q/G | 0.3909 | ambiguous | 0.4307 | ambiguous | -0.452 | Destabilizing | 0.997 | D | 0.545 | neutral | None | None | None | None | I |
Q/H | 0.2628 | likely_benign | 0.3 | benign | -0.422 | Destabilizing | 0.999 | D | 0.622 | neutral | N | 0.511761552 | None | None | I |
Q/I | 0.3165 | likely_benign | 0.3474 | ambiguous | 0.118 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
Q/K | 0.115 | likely_benign | 0.1239 | benign | 0.068 | Stabilizing | 0.997 | D | 0.519 | neutral | N | 0.476085967 | None | None | I |
Q/L | 0.1649 | likely_benign | 0.1827 | benign | 0.118 | Stabilizing | 0.997 | D | 0.545 | neutral | N | 0.50081384 | None | None | I |
Q/M | 0.3007 | likely_benign | 0.3134 | benign | 0.457 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
Q/N | 0.3698 | ambiguous | 0.4106 | ambiguous | -0.208 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | I |
Q/P | 0.5564 | ambiguous | 0.6332 | pathogenic | 0.016 | Stabilizing | 0.999 | D | 0.606 | neutral | D | 0.530616672 | None | None | I |
Q/R | 0.1455 | likely_benign | 0.1591 | benign | 0.222 | Stabilizing | 0.997 | D | 0.583 | neutral | N | 0.483785517 | None | None | I |
Q/S | 0.2678 | likely_benign | 0.2783 | benign | -0.21 | Destabilizing | 0.997 | D | 0.543 | neutral | None | None | None | None | I |
Q/T | 0.175 | likely_benign | 0.1899 | benign | -0.095 | Destabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | I |
Q/V | 0.2012 | likely_benign | 0.2192 | benign | 0.016 | Stabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | I |
Q/W | 0.5576 | ambiguous | 0.6074 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
Q/Y | 0.4953 | ambiguous | 0.5542 | ambiguous | -0.212 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.