Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18469 | 55630;55631;55632 | chr2:178601685;178601684;178601683 | chr2:179466412;179466411;179466410 |
N2AB | 16828 | 50707;50708;50709 | chr2:178601685;178601684;178601683 | chr2:179466412;179466411;179466410 |
N2A | 15901 | 47926;47927;47928 | chr2:178601685;178601684;178601683 | chr2:179466412;179466411;179466410 |
N2B | 9404 | 28435;28436;28437 | chr2:178601685;178601684;178601683 | chr2:179466412;179466411;179466410 |
Novex-1 | 9529 | 28810;28811;28812 | chr2:178601685;178601684;178601683 | chr2:179466412;179466411;179466410 |
Novex-2 | 9596 | 29011;29012;29013 | chr2:178601685;178601684;178601683 | chr2:179466412;179466411;179466410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs1044328956 | -0.217 | 0.998 | N | 0.684 | 0.429 | 0.622259118589 | gnomAD-2.1.1 | 2.09E-05 | None | None | None | None | I | None | 0 | 1.2282E-04 | None | 1.05686E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
T/P | rs1044328956 | -0.217 | 0.998 | N | 0.684 | 0.429 | 0.622259118589 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 1.96721E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs1044328956 | -0.217 | 0.998 | N | 0.684 | 0.429 | 0.622259118589 | gnomAD-4.0.0 | 8.10793E-06 | None | None | None | None | I | None | 0 | 1.90338E-04 | None | 0 | 0 | None | 0 | 0 | 8.4974E-07 | 0 | 1.61368E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1262 | likely_benign | 0.1376 | benign | -0.484 | Destabilizing | 0.954 | D | 0.574 | neutral | N | 0.512628344 | None | None | I |
T/C | 0.5366 | ambiguous | 0.5361 | ambiguous | -0.214 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
T/D | 0.625 | likely_pathogenic | 0.6655 | pathogenic | -0.199 | Destabilizing | 0.985 | D | 0.619 | neutral | None | None | None | None | I |
T/E | 0.4267 | ambiguous | 0.4631 | ambiguous | -0.275 | Destabilizing | 0.97 | D | 0.631 | neutral | None | None | None | None | I |
T/F | 0.3238 | likely_benign | 0.3454 | ambiguous | -0.928 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | I |
T/G | 0.4467 | ambiguous | 0.4746 | ambiguous | -0.632 | Destabilizing | 0.985 | D | 0.634 | neutral | None | None | None | None | I |
T/H | 0.3116 | likely_benign | 0.3107 | benign | -1.019 | Destabilizing | 0.092 | N | 0.371 | neutral | None | None | None | None | I |
T/I | 0.1837 | likely_benign | 0.1864 | benign | -0.208 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | D | 0.528752589 | None | None | I |
T/K | 0.2434 | likely_benign | 0.2428 | benign | -0.519 | Destabilizing | 0.97 | D | 0.626 | neutral | None | None | None | None | I |
T/L | 0.1486 | likely_benign | 0.1661 | benign | -0.208 | Destabilizing | 0.985 | D | 0.611 | neutral | None | None | None | None | I |
T/M | 0.0855 | likely_benign | 0.0902 | benign | 0.178 | Stabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
T/N | 0.1936 | likely_benign | 0.2067 | benign | -0.274 | Destabilizing | 0.961 | D | 0.543 | neutral | N | 0.502523726 | None | None | I |
T/P | 0.4751 | ambiguous | 0.5768 | pathogenic | -0.271 | Destabilizing | 0.998 | D | 0.684 | prob.neutral | N | 0.492181379 | None | None | I |
T/Q | 0.2494 | likely_benign | 0.2625 | benign | -0.576 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | I |
T/R | 0.2123 | likely_benign | 0.2299 | benign | -0.191 | Destabilizing | 0.991 | D | 0.638 | neutral | None | None | None | None | I |
T/S | 0.1597 | likely_benign | 0.1657 | benign | -0.46 | Destabilizing | 0.98 | D | 0.583 | neutral | N | 0.471107008 | None | None | I |
T/V | 0.1435 | likely_benign | 0.1427 | benign | -0.271 | Destabilizing | 0.995 | D | 0.523 | neutral | None | None | None | None | I |
T/W | 0.6783 | likely_pathogenic | 0.7103 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
T/Y | 0.3559 | ambiguous | 0.3779 | ambiguous | -0.642 | Destabilizing | 0.991 | D | 0.645 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.