Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18471 | 55636;55637;55638 | chr2:178601679;178601678;178601677 | chr2:179466406;179466405;179466404 |
N2AB | 16830 | 50713;50714;50715 | chr2:178601679;178601678;178601677 | chr2:179466406;179466405;179466404 |
N2A | 15903 | 47932;47933;47934 | chr2:178601679;178601678;178601677 | chr2:179466406;179466405;179466404 |
N2B | 9406 | 28441;28442;28443 | chr2:178601679;178601678;178601677 | chr2:179466406;179466405;179466404 |
Novex-1 | 9531 | 28816;28817;28818 | chr2:178601679;178601678;178601677 | chr2:179466406;179466405;179466404 |
Novex-2 | 9598 | 29017;29018;29019 | chr2:178601679;178601678;178601677 | chr2:179466406;179466405;179466404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.722 | N | 0.563 | 0.198 | 0.18274738541 | gnomAD-4.0.0 | 1.62081E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88507E-06 | 0 | 0 |
N/I | None | None | 0.949 | N | 0.8 | 0.325 | 0.590905048371 | gnomAD-4.0.0 | 4.87824E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.66852E-06 | 0 | 0 |
N/S | rs1310909549 | 0.045 | 0.034 | N | 0.366 | 0.101 | 0.101711395817 | gnomAD-2.1.1 | 1.7E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.35599E-04 | None | 0 | None | 0 | 0 | 0 |
N/S | rs1310909549 | 0.045 | 0.034 | N | 0.366 | 0.101 | 0.101711395817 | gnomAD-4.0.0 | 1.62608E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78489E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1713 | likely_benign | 0.1564 | benign | -0.356 | Destabilizing | 0.633 | D | 0.728 | prob.delet. | None | None | None | None | N |
N/C | 0.1943 | likely_benign | 0.178 | benign | 0.447 | Stabilizing | 0.996 | D | 0.786 | deleterious | None | None | None | None | N |
N/D | 0.2205 | likely_benign | 0.21 | benign | -0.15 | Destabilizing | 0.722 | D | 0.563 | neutral | N | 0.483398728 | None | None | N |
N/E | 0.4798 | ambiguous | 0.4423 | ambiguous | -0.194 | Destabilizing | 0.775 | D | 0.542 | neutral | None | None | None | None | N |
N/F | 0.3021 | likely_benign | 0.2656 | benign | -0.752 | Destabilizing | 0.923 | D | 0.8 | deleterious | None | None | None | None | N |
N/G | 0.2516 | likely_benign | 0.2272 | benign | -0.523 | Destabilizing | 0.633 | D | 0.559 | neutral | None | None | None | None | N |
N/H | 0.0807 | likely_benign | 0.0826 | benign | -0.627 | Destabilizing | 0.008 | N | 0.36 | neutral | N | 0.500600409 | None | None | N |
N/I | 0.1395 | likely_benign | 0.1215 | benign | -0.002 | Destabilizing | 0.949 | D | 0.8 | deleterious | N | 0.490403271 | None | None | N |
N/K | 0.4193 | ambiguous | 0.3814 | ambiguous | 0.077 | Stabilizing | 0.565 | D | 0.581 | neutral | N | 0.479067557 | None | None | N |
N/L | 0.1788 | likely_benign | 0.1538 | benign | -0.002 | Destabilizing | 0.923 | D | 0.755 | deleterious | None | None | None | None | N |
N/M | 0.2643 | likely_benign | 0.2273 | benign | 0.499 | Stabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
N/P | 0.569 | likely_pathogenic | 0.5679 | pathogenic | -0.094 | Destabilizing | 0.961 | D | 0.802 | deleterious | None | None | None | None | N |
N/Q | 0.3213 | likely_benign | 0.2935 | benign | -0.39 | Destabilizing | 0.923 | D | 0.609 | neutral | None | None | None | None | N |
N/R | 0.4165 | ambiguous | 0.3932 | ambiguous | 0.168 | Stabilizing | 0.923 | D | 0.596 | neutral | None | None | None | None | N |
N/S | 0.0664 | likely_benign | 0.0627 | benign | -0.086 | Destabilizing | 0.034 | N | 0.366 | neutral | N | 0.435951498 | None | None | N |
N/T | 0.0945 | likely_benign | 0.0864 | benign | 0.002 | Stabilizing | 0.565 | D | 0.573 | neutral | N | 0.480107707 | None | None | N |
N/V | 0.1403 | likely_benign | 0.125 | benign | -0.094 | Destabilizing | 0.923 | D | 0.789 | deleterious | None | None | None | None | N |
N/W | 0.6143 | likely_pathogenic | 0.5735 | pathogenic | -0.736 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/Y | 0.1089 | likely_benign | 0.1025 | benign | -0.473 | Destabilizing | 0.82 | D | 0.804 | deleterious | D | 0.530749958 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.