Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18472 | 55639;55640;55641 | chr2:178601676;178601675;178601674 | chr2:179466403;179466402;179466401 |
N2AB | 16831 | 50716;50717;50718 | chr2:178601676;178601675;178601674 | chr2:179466403;179466402;179466401 |
N2A | 15904 | 47935;47936;47937 | chr2:178601676;178601675;178601674 | chr2:179466403;179466402;179466401 |
N2B | 9407 | 28444;28445;28446 | chr2:178601676;178601675;178601674 | chr2:179466403;179466402;179466401 |
Novex-1 | 9532 | 28819;28820;28821 | chr2:178601676;178601675;178601674 | chr2:179466403;179466402;179466401 |
Novex-2 | 9599 | 29020;29021;29022 | chr2:178601676;178601675;178601674 | chr2:179466403;179466402;179466401 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs2053489886 | None | 0.784 | N | 0.671 | 0.345 | 0.748464722647 | gnomAD-4.0.0 | 4.83489E-06 | None | None | None | None | N | None | 6.16789E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 8.37633E-05 |
C/R | rs2053489886 | None | 0.975 | N | 0.769 | 0.366 | 0.793074248023 | gnomAD-4.0.0 | 6.90698E-07 | None | None | None | None | N | None | 3.08394E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.645 | likely_pathogenic | 0.5885 | pathogenic | -2.055 | Highly Destabilizing | 0.085 | N | 0.347 | neutral | None | None | None | None | N |
C/D | 0.9961 | likely_pathogenic | 0.9962 | pathogenic | -1.047 | Destabilizing | 0.936 | D | 0.748 | deleterious | None | None | None | None | N |
C/E | 0.9961 | likely_pathogenic | 0.9961 | pathogenic | -0.847 | Destabilizing | 0.828 | D | 0.714 | prob.delet. | None | None | None | None | N |
C/F | 0.5211 | ambiguous | 0.4628 | ambiguous | -1.317 | Destabilizing | 0.642 | D | 0.714 | prob.delet. | N | 0.477838193 | None | None | N |
C/G | 0.6478 | likely_pathogenic | 0.6359 | pathogenic | -2.435 | Highly Destabilizing | 0.784 | D | 0.671 | neutral | N | 0.503659357 | None | None | N |
C/H | 0.9776 | likely_pathogenic | 0.975 | pathogenic | -2.464 | Highly Destabilizing | 0.981 | D | 0.726 | prob.delet. | None | None | None | None | N |
C/I | 0.4088 | ambiguous | 0.3652 | ambiguous | -1.032 | Destabilizing | 0.001 | N | 0.363 | neutral | None | None | None | None | N |
C/K | 0.9956 | likely_pathogenic | 0.9956 | pathogenic | -1.241 | Destabilizing | 0.828 | D | 0.699 | prob.neutral | None | None | None | None | N |
C/L | 0.5528 | ambiguous | 0.4994 | ambiguous | -1.032 | Destabilizing | 0.085 | N | 0.492 | neutral | None | None | None | None | N |
C/M | 0.7606 | likely_pathogenic | 0.7078 | pathogenic | 0.146 | Stabilizing | 0.893 | D | 0.747 | deleterious | None | None | None | None | N |
C/N | 0.9752 | likely_pathogenic | 0.9739 | pathogenic | -1.644 | Destabilizing | 0.981 | D | 0.767 | deleterious | None | None | None | None | N |
C/P | 0.994 | likely_pathogenic | 0.9956 | pathogenic | -1.349 | Destabilizing | 0.936 | D | 0.761 | deleterious | None | None | None | None | N |
C/Q | 0.9857 | likely_pathogenic | 0.9846 | pathogenic | -1.302 | Destabilizing | 0.981 | D | 0.762 | deleterious | None | None | None | None | N |
C/R | 0.9695 | likely_pathogenic | 0.9702 | pathogenic | -1.411 | Destabilizing | 0.975 | D | 0.769 | deleterious | N | 0.485123352 | None | None | N |
C/S | 0.7735 | likely_pathogenic | 0.7413 | pathogenic | -2.13 | Highly Destabilizing | 0.6 | D | 0.597 | neutral | N | 0.521551684 | None | None | N |
C/T | 0.7493 | likely_pathogenic | 0.7055 | pathogenic | -1.717 | Destabilizing | 0.495 | N | 0.589 | neutral | None | None | None | None | N |
C/V | 0.2868 | likely_benign | 0.2609 | benign | -1.349 | Destabilizing | 0.001 | N | 0.321 | neutral | None | None | None | None | N |
C/W | 0.9337 | likely_pathogenic | 0.9293 | pathogenic | -1.447 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | N | 0.485376842 | None | None | N |
C/Y | 0.8336 | likely_pathogenic | 0.8143 | pathogenic | -1.397 | Destabilizing | 0.917 | D | 0.753 | deleterious | N | 0.484869862 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.