Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18482 | 55669;55670;55671 | chr2:178601553;178601552;178601551 | chr2:179466280;179466279;179466278 |
N2AB | 16841 | 50746;50747;50748 | chr2:178601553;178601552;178601551 | chr2:179466280;179466279;179466278 |
N2A | 15914 | 47965;47966;47967 | chr2:178601553;178601552;178601551 | chr2:179466280;179466279;179466278 |
N2B | 9417 | 28474;28475;28476 | chr2:178601553;178601552;178601551 | chr2:179466280;179466279;179466278 |
Novex-1 | 9542 | 28849;28850;28851 | chr2:178601553;178601552;178601551 | chr2:179466280;179466279;179466278 |
Novex-2 | 9609 | 29050;29051;29052 | chr2:178601553;178601552;178601551 | chr2:179466280;179466279;179466278 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.998 | N | 0.829 | 0.484 | 0.65545073463 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0795 | likely_benign | 0.0821 | benign | -1.666 | Destabilizing | 0.619 | D | 0.379 | neutral | N | 0.467471191 | None | None | I |
P/C | 0.5361 | ambiguous | 0.5267 | ambiguous | -0.86 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
P/D | 0.8516 | likely_pathogenic | 0.8517 | pathogenic | -1.853 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | I |
P/E | 0.5207 | ambiguous | 0.5042 | ambiguous | -1.867 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
P/F | 0.6474 | likely_pathogenic | 0.6368 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
P/G | 0.5039 | ambiguous | 0.5461 | ambiguous | -1.97 | Destabilizing | 0.988 | D | 0.782 | deleterious | None | None | None | None | I |
P/H | 0.4251 | ambiguous | 0.4312 | ambiguous | -1.589 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
P/I | 0.4026 | ambiguous | 0.3876 | ambiguous | -0.918 | Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | I |
P/K | 0.4638 | ambiguous | 0.4754 | ambiguous | -1.448 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | I |
P/L | 0.2255 | likely_benign | 0.226 | benign | -0.918 | Destabilizing | 0.998 | D | 0.829 | deleterious | N | 0.509987286 | None | None | I |
P/M | 0.3841 | ambiguous | 0.3738 | ambiguous | -0.554 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
P/N | 0.6643 | likely_pathogenic | 0.6707 | pathogenic | -1.14 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
P/Q | 0.2586 | likely_benign | 0.2678 | benign | -1.358 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.498996147 | None | None | I |
P/R | 0.353 | ambiguous | 0.3736 | ambiguous | -0.848 | Destabilizing | 0.999 | D | 0.863 | deleterious | N | 0.499503126 | None | None | I |
P/S | 0.1985 | likely_benign | 0.2136 | benign | -1.56 | Destabilizing | 0.984 | D | 0.751 | deleterious | N | 0.477182136 | None | None | I |
P/T | 0.2292 | likely_benign | 0.2409 | benign | -1.487 | Destabilizing | 0.998 | D | 0.807 | deleterious | N | 0.505859456 | None | None | I |
P/V | 0.2871 | likely_benign | 0.2915 | benign | -1.135 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | I |
P/W | 0.8661 | likely_pathogenic | 0.8624 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/Y | 0.6897 | likely_pathogenic | 0.683 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.