Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18491 | 55696;55697;55698 | chr2:178601526;178601525;178601524 | chr2:179466253;179466252;179466251 |
N2AB | 16850 | 50773;50774;50775 | chr2:178601526;178601525;178601524 | chr2:179466253;179466252;179466251 |
N2A | 15923 | 47992;47993;47994 | chr2:178601526;178601525;178601524 | chr2:179466253;179466252;179466251 |
N2B | 9426 | 28501;28502;28503 | chr2:178601526;178601525;178601524 | chr2:179466253;179466252;179466251 |
Novex-1 | 9551 | 28876;28877;28878 | chr2:178601526;178601525;178601524 | chr2:179466253;179466252;179466251 |
Novex-2 | 9618 | 29077;29078;29079 | chr2:178601526;178601525;178601524 | chr2:179466253;179466252;179466251 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.896 | N | 0.405 | 0.374 | 0.648347046735 | gnomAD-4.0.0 | 3.18764E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7259E-06 | 0 | 0 |
I/V | None | None | 0.004 | N | 0.087 | 0.076 | 0.485493271093 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8011 | likely_pathogenic | 0.8464 | pathogenic | -1.265 | Destabilizing | 0.702 | D | 0.414 | neutral | None | None | None | None | N |
I/C | 0.8373 | likely_pathogenic | 0.8798 | pathogenic | -1.131 | Destabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | N |
I/D | 0.9842 | likely_pathogenic | 0.9874 | pathogenic | -1.563 | Destabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | N |
I/E | 0.9571 | likely_pathogenic | 0.9645 | pathogenic | -1.615 | Destabilizing | 0.988 | D | 0.565 | neutral | None | None | None | None | N |
I/F | 0.6548 | likely_pathogenic | 0.6476 | pathogenic | -1.418 | Destabilizing | 0.984 | D | 0.453 | neutral | N | 0.476425348 | None | None | N |
I/G | 0.9622 | likely_pathogenic | 0.9707 | pathogenic | -1.478 | Destabilizing | 0.988 | D | 0.509 | neutral | None | None | None | None | N |
I/H | 0.952 | likely_pathogenic | 0.9605 | pathogenic | -0.934 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
I/K | 0.8857 | likely_pathogenic | 0.9129 | pathogenic | -0.773 | Destabilizing | 0.988 | D | 0.572 | neutral | None | None | None | None | N |
I/L | 0.3786 | ambiguous | 0.3979 | ambiguous | -0.776 | Destabilizing | 0.437 | N | 0.188 | neutral | N | 0.496471521 | None | None | N |
I/M | 0.2976 | likely_benign | 0.3365 | benign | -0.576 | Destabilizing | 0.984 | D | 0.509 | neutral | N | 0.477639889 | None | None | N |
I/N | 0.8322 | likely_pathogenic | 0.8703 | pathogenic | -0.697 | Destabilizing | 0.995 | D | 0.587 | neutral | N | 0.488235726 | None | None | N |
I/P | 0.9359 | likely_pathogenic | 0.9449 | pathogenic | -0.91 | Destabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | N |
I/Q | 0.9217 | likely_pathogenic | 0.94 | pathogenic | -1.018 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | N |
I/R | 0.871 | likely_pathogenic | 0.8925 | pathogenic | -0.24 | Destabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | N |
I/S | 0.8215 | likely_pathogenic | 0.8628 | pathogenic | -1.138 | Destabilizing | 0.984 | D | 0.46 | neutral | N | 0.469068288 | None | None | N |
I/T | 0.536 | ambiguous | 0.6457 | pathogenic | -1.09 | Destabilizing | 0.896 | D | 0.405 | neutral | N | 0.498973108 | None | None | N |
I/V | 0.0731 | likely_benign | 0.0789 | benign | -0.91 | Destabilizing | 0.004 | N | 0.087 | neutral | N | 0.3966326 | None | None | N |
I/W | 0.9816 | likely_pathogenic | 0.9855 | pathogenic | -1.484 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
I/Y | 0.9229 | likely_pathogenic | 0.932 | pathogenic | -1.14 | Destabilizing | 0.996 | D | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.