Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18495 | 55708;55709;55710 | chr2:178601514;178601513;178601512 | chr2:179466241;179466240;179466239 |
N2AB | 16854 | 50785;50786;50787 | chr2:178601514;178601513;178601512 | chr2:179466241;179466240;179466239 |
N2A | 15927 | 48004;48005;48006 | chr2:178601514;178601513;178601512 | chr2:179466241;179466240;179466239 |
N2B | 9430 | 28513;28514;28515 | chr2:178601514;178601513;178601512 | chr2:179466241;179466240;179466239 |
Novex-1 | 9555 | 28888;28889;28890 | chr2:178601514;178601513;178601512 | chr2:179466241;179466240;179466239 |
Novex-2 | 9622 | 29089;29090;29091 | chr2:178601514;178601513;178601512 | chr2:179466241;179466240;179466239 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1213190093 | -0.687 | 0.934 | N | 0.527 | 0.411 | 0.4897983601 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/R | rs1213190093 | -0.687 | 0.934 | N | 0.527 | 0.411 | 0.4897983601 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/R | rs1213190093 | -0.687 | 0.934 | N | 0.527 | 0.411 | 0.4897983601 | gnomAD-4.0.0 | 6.84559E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9985E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1675 | likely_benign | 0.1915 | benign | -0.629 | Destabilizing | 0.525 | D | 0.348 | neutral | None | None | None | None | N |
S/C | 0.1473 | likely_benign | 0.175 | benign | -0.782 | Destabilizing | 0.997 | D | 0.507 | neutral | N | 0.479154962 | None | None | N |
S/D | 0.8165 | likely_pathogenic | 0.8304 | pathogenic | -1.365 | Destabilizing | 0.728 | D | 0.411 | neutral | None | None | None | None | N |
S/E | 0.8233 | likely_pathogenic | 0.833 | pathogenic | -1.338 | Destabilizing | 0.842 | D | 0.429 | neutral | None | None | None | None | N |
S/F | 0.3135 | likely_benign | 0.3709 | ambiguous | -0.932 | Destabilizing | 0.974 | D | 0.596 | neutral | None | None | None | None | N |
S/G | 0.184 | likely_benign | 0.2167 | benign | -0.87 | Destabilizing | 0.454 | N | 0.399 | neutral | N | 0.511081188 | None | None | N |
S/H | 0.4632 | ambiguous | 0.5099 | ambiguous | -1.443 | Destabilizing | 0.974 | D | 0.514 | neutral | None | None | None | None | N |
S/I | 0.4801 | ambiguous | 0.5469 | ambiguous | -0.09 | Destabilizing | 0.934 | D | 0.591 | neutral | N | 0.492232788 | None | None | N |
S/K | 0.8723 | likely_pathogenic | 0.894 | pathogenic | -0.808 | Destabilizing | 0.842 | D | 0.429 | neutral | None | None | None | None | N |
S/L | 0.2217 | likely_benign | 0.2607 | benign | -0.09 | Destabilizing | 0.728 | D | 0.533 | neutral | None | None | None | None | N |
S/M | 0.2718 | likely_benign | 0.3507 | ambiguous | 0.193 | Stabilizing | 0.998 | D | 0.512 | neutral | None | None | None | None | N |
S/N | 0.2678 | likely_benign | 0.3047 | benign | -1.064 | Destabilizing | 0.012 | N | 0.177 | neutral | N | 0.516295006 | None | None | N |
S/P | 0.9849 | likely_pathogenic | 0.984 | pathogenic | -0.237 | Destabilizing | 0.974 | D | 0.533 | neutral | None | None | None | None | N |
S/Q | 0.6424 | likely_pathogenic | 0.6941 | pathogenic | -1.256 | Destabilizing | 0.974 | D | 0.46 | neutral | None | None | None | None | N |
S/R | 0.834 | likely_pathogenic | 0.8528 | pathogenic | -0.69 | Destabilizing | 0.934 | D | 0.527 | neutral | N | 0.484381975 | None | None | N |
S/T | 0.0918 | likely_benign | 0.1062 | benign | -0.896 | Destabilizing | 0.007 | N | 0.107 | neutral | N | 0.4501073 | None | None | N |
S/V | 0.4168 | ambiguous | 0.486 | ambiguous | -0.237 | Destabilizing | 0.728 | D | 0.523 | neutral | None | None | None | None | N |
S/W | 0.6101 | likely_pathogenic | 0.6488 | pathogenic | -1.013 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
S/Y | 0.3108 | likely_benign | 0.362 | ambiguous | -0.662 | Destabilizing | 0.991 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.