Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18501 | 55726;55727;55728 | chr2:178601496;178601495;178601494 | chr2:179466223;179466222;179466221 |
N2AB | 16860 | 50803;50804;50805 | chr2:178601496;178601495;178601494 | chr2:179466223;179466222;179466221 |
N2A | 15933 | 48022;48023;48024 | chr2:178601496;178601495;178601494 | chr2:179466223;179466222;179466221 |
N2B | 9436 | 28531;28532;28533 | chr2:178601496;178601495;178601494 | chr2:179466223;179466222;179466221 |
Novex-1 | 9561 | 28906;28907;28908 | chr2:178601496;178601495;178601494 | chr2:179466223;179466222;179466221 |
Novex-2 | 9628 | 29107;29108;29109 | chr2:178601496;178601495;178601494 | chr2:179466223;179466222;179466221 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.701 | 0.263 | 0.201204373187 | gnomAD-4.0.0 | 6.8453E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99807E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.621 | likely_pathogenic | 0.6551 | pathogenic | -0.182 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/C | 0.8226 | likely_pathogenic | 0.8336 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
K/D | 0.7999 | likely_pathogenic | 0.8303 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
K/E | 0.4709 | ambiguous | 0.4777 | ambiguous | 0.054 | Stabilizing | 0.999 | D | 0.599 | neutral | N | 0.442058246 | None | None | N |
K/F | 0.9367 | likely_pathogenic | 0.9442 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
K/G | 0.6993 | likely_pathogenic | 0.7415 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/H | 0.4735 | ambiguous | 0.51 | ambiguous | -0.814 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
K/I | 0.6752 | likely_pathogenic | 0.697 | pathogenic | 0.55 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
K/L | 0.6163 | likely_pathogenic | 0.6346 | pathogenic | 0.55 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/M | 0.5096 | ambiguous | 0.5237 | ambiguous | 0.363 | Stabilizing | 1.0 | D | 0.743 | deleterious | N | 0.47325857 | None | None | N |
K/N | 0.638 | likely_pathogenic | 0.6797 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.481136709 | None | None | N |
K/P | 0.9794 | likely_pathogenic | 0.9855 | pathogenic | 0.336 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
K/Q | 0.2155 | likely_benign | 0.2211 | benign | -0.103 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.495066011 | None | None | N |
K/R | 0.1034 | likely_benign | 0.1063 | benign | -0.327 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.497914315 | None | None | N |
K/S | 0.6881 | likely_pathogenic | 0.7189 | pathogenic | -0.5 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
K/T | 0.4231 | ambiguous | 0.452 | ambiguous | -0.277 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.474458666 | None | None | N |
K/V | 0.5896 | likely_pathogenic | 0.6106 | pathogenic | 0.336 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
K/W | 0.9312 | likely_pathogenic | 0.9383 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
K/Y | 0.8663 | likely_pathogenic | 0.878 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.