Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18509 | 55750;55751;55752 | chr2:178601472;178601471;178601470 | chr2:179466199;179466198;179466197 |
N2AB | 16868 | 50827;50828;50829 | chr2:178601472;178601471;178601470 | chr2:179466199;179466198;179466197 |
N2A | 15941 | 48046;48047;48048 | chr2:178601472;178601471;178601470 | chr2:179466199;179466198;179466197 |
N2B | 9444 | 28555;28556;28557 | chr2:178601472;178601471;178601470 | chr2:179466199;179466198;179466197 |
Novex-1 | 9569 | 28930;28931;28932 | chr2:178601472;178601471;178601470 | chr2:179466199;179466198;179466197 |
Novex-2 | 9636 | 29131;29132;29133 | chr2:178601472;178601471;178601470 | chr2:179466199;179466198;179466197 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs765073012 | -0.005 | 0.997 | N | 0.747 | 0.514 | 0.362160248664 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
D/V | rs765073012 | -0.005 | 0.997 | N | 0.747 | 0.514 | 0.362160248664 | gnomAD-4.0.0 | 4.77897E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.30219E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6547 | likely_pathogenic | 0.668 | pathogenic | -0.642 | Destabilizing | 0.978 | D | 0.658 | neutral | N | 0.375179893 | None | None | I |
D/C | 0.8644 | likely_pathogenic | 0.859 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
D/E | 0.4604 | ambiguous | 0.4542 | ambiguous | -0.751 | Destabilizing | 0.198 | N | 0.359 | neutral | N | 0.403270571 | None | None | I |
D/F | 0.9281 | likely_pathogenic | 0.9326 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
D/G | 0.7973 | likely_pathogenic | 0.8133 | pathogenic | -0.988 | Destabilizing | 0.989 | D | 0.623 | neutral | N | 0.414559426 | None | None | I |
D/H | 0.8252 | likely_pathogenic | 0.8063 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.494700652 | None | None | I |
D/I | 0.9375 | likely_pathogenic | 0.9407 | pathogenic | 0.271 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | I |
D/K | 0.9576 | likely_pathogenic | 0.9564 | pathogenic | -0.483 | Destabilizing | 0.983 | D | 0.623 | neutral | None | None | None | None | I |
D/L | 0.9152 | likely_pathogenic | 0.9207 | pathogenic | 0.271 | Stabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | I |
D/M | 0.9538 | likely_pathogenic | 0.9554 | pathogenic | 0.774 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
D/N | 0.4896 | ambiguous | 0.4829 | ambiguous | -0.9 | Destabilizing | 0.989 | D | 0.695 | prob.neutral | N | 0.456566338 | None | None | I |
D/P | 0.9966 | likely_pathogenic | 0.997 | pathogenic | -0.009 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
D/Q | 0.8695 | likely_pathogenic | 0.8654 | pathogenic | -0.757 | Destabilizing | 0.995 | D | 0.671 | neutral | None | None | None | None | I |
D/R | 0.9574 | likely_pathogenic | 0.958 | pathogenic | -0.34 | Destabilizing | 0.995 | D | 0.717 | prob.delet. | None | None | None | None | I |
D/S | 0.4762 | ambiguous | 0.4451 | ambiguous | -1.137 | Destabilizing | 0.983 | D | 0.618 | neutral | None | None | None | None | I |
D/T | 0.838 | likely_pathogenic | 0.8382 | pathogenic | -0.853 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | I |
D/V | 0.8333 | likely_pathogenic | 0.8216 | pathogenic | -0.009 | Destabilizing | 0.997 | D | 0.747 | deleterious | N | 0.446792062 | None | None | I |
D/W | 0.9824 | likely_pathogenic | 0.9837 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
D/Y | 0.7118 | likely_pathogenic | 0.6959 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.486889245 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.