Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18519 | 55780;55781;55782 | chr2:178601442;178601441;178601440 | chr2:179466169;179466168;179466167 |
N2AB | 16878 | 50857;50858;50859 | chr2:178601442;178601441;178601440 | chr2:179466169;179466168;179466167 |
N2A | 15951 | 48076;48077;48078 | chr2:178601442;178601441;178601440 | chr2:179466169;179466168;179466167 |
N2B | 9454 | 28585;28586;28587 | chr2:178601442;178601441;178601440 | chr2:179466169;179466168;179466167 |
Novex-1 | 9579 | 28960;28961;28962 | chr2:178601442;178601441;178601440 | chr2:179466169;179466168;179466167 |
Novex-2 | 9646 | 29161;29162;29163 | chr2:178601442;178601441;178601440 | chr2:179466169;179466168;179466167 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.148 | 0.168 | 0.107399877778 | gnomAD-4.0.0 | 1.36906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79955E-06 | 0 | 0 |
R/T | None | None | 0.117 | N | 0.454 | 0.13 | 0.200317383148 | gnomAD-4.0.0 | 6.84529E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99776E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8925 | likely_pathogenic | 0.9453 | pathogenic | -2.209 | Highly Destabilizing | 0.035 | N | 0.454 | neutral | None | None | None | None | N |
R/C | 0.4738 | ambiguous | 0.6125 | pathogenic | -2.035 | Highly Destabilizing | 0.935 | D | 0.659 | neutral | None | None | None | None | N |
R/D | 0.9847 | likely_pathogenic | 0.9931 | pathogenic | -0.647 | Destabilizing | 0.149 | N | 0.553 | neutral | None | None | None | None | N |
R/E | 0.8697 | likely_pathogenic | 0.9353 | pathogenic | -0.443 | Destabilizing | 0.035 | N | 0.46 | neutral | None | None | None | None | N |
R/F | 0.9048 | likely_pathogenic | 0.9715 | pathogenic | -1.618 | Destabilizing | 0.791 | D | 0.651 | neutral | None | None | None | None | N |
R/G | 0.8369 | likely_pathogenic | 0.9214 | pathogenic | -2.546 | Highly Destabilizing | 0.117 | N | 0.515 | neutral | N | 0.469473135 | None | None | N |
R/H | 0.3581 | ambiguous | 0.4816 | ambiguous | -2.26 | Highly Destabilizing | 0.555 | D | 0.441 | neutral | None | None | None | None | N |
R/I | 0.8336 | likely_pathogenic | 0.9101 | pathogenic | -1.23 | Destabilizing | 0.555 | D | 0.636 | neutral | None | None | None | None | N |
R/K | 0.0918 | likely_benign | 0.1218 | benign | -1.335 | Destabilizing | None | N | 0.148 | neutral | N | 0.405214798 | None | None | N |
R/L | 0.7 | likely_pathogenic | 0.8255 | pathogenic | -1.23 | Destabilizing | 0.149 | N | 0.515 | neutral | None | None | None | None | N |
R/M | 0.6773 | likely_pathogenic | 0.8144 | pathogenic | -1.596 | Destabilizing | 0.741 | D | 0.516 | neutral | D | 0.525602349 | None | None | N |
R/N | 0.9412 | likely_pathogenic | 0.9726 | pathogenic | -1.151 | Destabilizing | 0.149 | N | 0.432 | neutral | None | None | None | None | N |
R/P | 0.995 | likely_pathogenic | 0.9968 | pathogenic | -1.545 | Destabilizing | 0.555 | D | 0.562 | neutral | None | None | None | None | N |
R/Q | 0.281 | likely_benign | 0.3407 | ambiguous | -1.203 | Destabilizing | 0.081 | N | 0.458 | neutral | None | None | None | None | N |
R/S | 0.9449 | likely_pathogenic | 0.9779 | pathogenic | -2.279 | Highly Destabilizing | 0.062 | N | 0.453 | neutral | N | 0.490948271 | None | None | N |
R/T | 0.8739 | likely_pathogenic | 0.9387 | pathogenic | -1.857 | Destabilizing | 0.117 | N | 0.454 | neutral | N | 0.515846715 | None | None | N |
R/V | 0.8389 | likely_pathogenic | 0.9205 | pathogenic | -1.545 | Destabilizing | 0.38 | N | 0.589 | neutral | None | None | None | None | N |
R/W | 0.6919 | likely_pathogenic | 0.8437 | pathogenic | -0.983 | Destabilizing | 0.915 | D | 0.691 | prob.neutral | N | 0.519540381 | None | None | N |
R/Y | 0.7926 | likely_pathogenic | 0.9163 | pathogenic | -0.875 | Destabilizing | 0.555 | D | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.