Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18531 | 55816;55817;55818 | chr2:178601406;178601405;178601404 | chr2:179466133;179466132;179466131 |
N2AB | 16890 | 50893;50894;50895 | chr2:178601406;178601405;178601404 | chr2:179466133;179466132;179466131 |
N2A | 15963 | 48112;48113;48114 | chr2:178601406;178601405;178601404 | chr2:179466133;179466132;179466131 |
N2B | 9466 | 28621;28622;28623 | chr2:178601406;178601405;178601404 | chr2:179466133;179466132;179466131 |
Novex-1 | 9591 | 28996;28997;28998 | chr2:178601406;178601405;178601404 | chr2:179466133;179466132;179466131 |
Novex-2 | 9658 | 29197;29198;29199 | chr2:178601406;178601405;178601404 | chr2:179466133;179466132;179466131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.01 | N | 0.177 | 0.136 | 0.199424873507 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0748 | likely_benign | 0.0722 | benign | -0.794 | Destabilizing | 0.001 | N | 0.15 | neutral | N | 0.406020088 | None | None | N |
P/C | 0.4331 | ambiguous | 0.4971 | ambiguous | -0.625 | Destabilizing | 0.944 | D | 0.352 | neutral | None | None | None | None | N |
P/D | 0.4307 | ambiguous | 0.4747 | ambiguous | -0.632 | Destabilizing | 0.704 | D | 0.317 | neutral | None | None | None | None | N |
P/E | 0.2953 | likely_benign | 0.3183 | benign | -0.738 | Destabilizing | 0.495 | N | 0.329 | neutral | None | None | None | None | N |
P/F | 0.5144 | ambiguous | 0.6056 | pathogenic | -0.933 | Destabilizing | 0.944 | D | 0.381 | neutral | None | None | None | None | N |
P/G | 0.2416 | likely_benign | 0.2554 | benign | -0.973 | Destabilizing | 0.329 | N | 0.312 | neutral | None | None | None | None | N |
P/H | 0.2015 | likely_benign | 0.2462 | benign | -0.522 | Destabilizing | 0.981 | D | 0.321 | neutral | None | None | None | None | N |
P/I | 0.2983 | likely_benign | 0.3332 | benign | -0.461 | Destabilizing | 0.704 | D | 0.421 | neutral | None | None | None | None | N |
P/K | 0.2757 | likely_benign | 0.342 | ambiguous | -0.666 | Destabilizing | 0.704 | D | 0.329 | neutral | None | None | None | None | N |
P/L | 0.1369 | likely_benign | 0.1544 | benign | -0.461 | Destabilizing | 0.425 | N | 0.341 | neutral | N | 0.485248876 | None | None | N |
P/M | 0.2808 | likely_benign | 0.3112 | benign | -0.327 | Destabilizing | 0.981 | D | 0.335 | neutral | None | None | None | None | N |
P/N | 0.2888 | likely_benign | 0.3045 | benign | -0.331 | Destabilizing | 0.704 | D | 0.353 | neutral | None | None | None | None | N |
P/Q | 0.1611 | likely_benign | 0.1838 | benign | -0.617 | Destabilizing | 0.784 | D | 0.408 | neutral | N | 0.458566493 | None | None | N |
P/R | 0.1909 | likely_benign | 0.2558 | benign | -0.073 | Destabilizing | 0.642 | D | 0.378 | neutral | N | 0.423856487 | None | None | N |
P/S | 0.1151 | likely_benign | 0.118 | benign | -0.721 | Destabilizing | 0.01 | N | 0.163 | neutral | N | 0.415218361 | None | None | N |
P/T | 0.0907 | likely_benign | 0.0926 | benign | -0.727 | Destabilizing | 0.01 | N | 0.177 | neutral | N | 0.420624181 | None | None | N |
P/V | 0.1796 | likely_benign | 0.1979 | benign | -0.536 | Destabilizing | 0.329 | N | 0.312 | neutral | None | None | None | None | N |
P/W | 0.6412 | likely_pathogenic | 0.7345 | pathogenic | -1.005 | Destabilizing | 0.995 | D | 0.396 | neutral | None | None | None | None | N |
P/Y | 0.448 | ambiguous | 0.5226 | ambiguous | -0.716 | Destabilizing | 0.981 | D | 0.388 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.