Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18538 | 55837;55838;55839 | chr2:178601385;178601384;178601383 | chr2:179466112;179466111;179466110 |
N2AB | 16897 | 50914;50915;50916 | chr2:178601385;178601384;178601383 | chr2:179466112;179466111;179466110 |
N2A | 15970 | 48133;48134;48135 | chr2:178601385;178601384;178601383 | chr2:179466112;179466111;179466110 |
N2B | 9473 | 28642;28643;28644 | chr2:178601385;178601384;178601383 | chr2:179466112;179466111;179466110 |
Novex-1 | 9598 | 29017;29018;29019 | chr2:178601385;178601384;178601383 | chr2:179466112;179466111;179466110 |
Novex-2 | 9665 | 29218;29219;29220 | chr2:178601385;178601384;178601383 | chr2:179466112;179466111;179466110 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.801 | N | 0.549 | 0.349 | 0.68170140072 | gnomAD-4.0.0 | 1.59342E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4346E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7521 | likely_pathogenic | 0.8813 | pathogenic | -2.578 | Highly Destabilizing | 0.842 | D | 0.541 | neutral | None | None | None | None | N |
F/C | 0.4322 | ambiguous | 0.5886 | pathogenic | -1.651 | Destabilizing | 0.997 | D | 0.617 | neutral | N | 0.435249704 | None | None | N |
F/D | 0.9821 | likely_pathogenic | 0.9903 | pathogenic | -2.729 | Highly Destabilizing | 0.016 | N | 0.53 | neutral | None | None | None | None | N |
F/E | 0.9799 | likely_pathogenic | 0.9891 | pathogenic | -2.527 | Highly Destabilizing | 0.728 | D | 0.56 | neutral | None | None | None | None | N |
F/G | 0.9261 | likely_pathogenic | 0.9663 | pathogenic | -3.02 | Highly Destabilizing | 0.915 | D | 0.562 | neutral | None | None | None | None | N |
F/H | 0.7773 | likely_pathogenic | 0.8188 | pathogenic | -1.485 | Destabilizing | 0.949 | D | 0.557 | neutral | None | None | None | None | N |
F/I | 0.5167 | ambiguous | 0.7017 | pathogenic | -1.158 | Destabilizing | 0.669 | D | 0.439 | neutral | N | 0.479539198 | None | None | N |
F/K | 0.9746 | likely_pathogenic | 0.9867 | pathogenic | -2.075 | Highly Destabilizing | 0.974 | D | 0.631 | neutral | None | None | None | None | N |
F/L | 0.8729 | likely_pathogenic | 0.9393 | pathogenic | -1.158 | Destabilizing | 0.005 | N | 0.186 | neutral | N | 0.430475815 | None | None | N |
F/M | 0.6151 | likely_pathogenic | 0.7399 | pathogenic | -0.845 | Destabilizing | 0.949 | D | 0.485 | neutral | None | None | None | None | N |
F/N | 0.9387 | likely_pathogenic | 0.9609 | pathogenic | -2.53 | Highly Destabilizing | 0.949 | D | 0.637 | neutral | None | None | None | None | N |
F/P | 0.9987 | likely_pathogenic | 0.9996 | pathogenic | -1.64 | Destabilizing | 0.991 | D | 0.638 | neutral | None | None | None | None | N |
F/Q | 0.9455 | likely_pathogenic | 0.967 | pathogenic | -2.452 | Highly Destabilizing | 0.974 | D | 0.635 | neutral | None | None | None | None | N |
F/R | 0.9404 | likely_pathogenic | 0.9673 | pathogenic | -1.61 | Destabilizing | 0.974 | D | 0.637 | neutral | None | None | None | None | N |
F/S | 0.7785 | likely_pathogenic | 0.8897 | pathogenic | -3.193 | Highly Destabilizing | 0.801 | D | 0.549 | neutral | N | 0.504995003 | None | None | N |
F/T | 0.8332 | likely_pathogenic | 0.9192 | pathogenic | -2.878 | Highly Destabilizing | 0.915 | D | 0.557 | neutral | None | None | None | None | N |
F/V | 0.4327 | ambiguous | 0.6299 | pathogenic | -1.64 | Destabilizing | 0.669 | D | 0.506 | neutral | N | 0.440708665 | None | None | N |
F/W | 0.5379 | ambiguous | 0.5712 | pathogenic | -0.236 | Destabilizing | 0.974 | D | 0.499 | neutral | None | None | None | None | N |
F/Y | 0.1781 | likely_benign | 0.1918 | benign | -0.593 | Destabilizing | 0.005 | N | 0.168 | neutral | N | 0.39651517 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.