Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18544 | 55855;55856;55857 | chr2:178601367;178601366;178601365 | chr2:179466094;179466093;179466092 |
N2AB | 16903 | 50932;50933;50934 | chr2:178601367;178601366;178601365 | chr2:179466094;179466093;179466092 |
N2A | 15976 | 48151;48152;48153 | chr2:178601367;178601366;178601365 | chr2:179466094;179466093;179466092 |
N2B | 9479 | 28660;28661;28662 | chr2:178601367;178601366;178601365 | chr2:179466094;179466093;179466092 |
Novex-1 | 9604 | 29035;29036;29037 | chr2:178601367;178601366;178601365 | chr2:179466094;179466093;179466092 |
Novex-2 | 9671 | 29236;29237;29238 | chr2:178601367;178601366;178601365 | chr2:179466094;179466093;179466092 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.859 | N | 0.644 | 0.464 | 0.713293215259 | gnomAD-4.0.0 | 4.78141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.36353E-05 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs924109444 | None | 0.004 | N | 0.138 | 0.074 | 0.19670166235 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 3.28947E-03 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs924109444 | None | 0.004 | N | 0.138 | 0.074 | 0.19670166235 | gnomAD-4.0.0 | 1.97384E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.268 | likely_benign | 0.2355 | benign | -1.08 | Destabilizing | 0.272 | N | 0.525 | neutral | None | None | None | None | N |
L/C | 0.5567 | ambiguous | 0.46 | ambiguous | -0.896 | Destabilizing | 0.968 | D | 0.593 | neutral | None | None | None | None | N |
L/D | 0.7521 | likely_pathogenic | 0.6476 | pathogenic | 0.079 | Stabilizing | 0.726 | D | 0.634 | neutral | None | None | None | None | N |
L/E | 0.4626 | ambiguous | 0.3745 | ambiguous | 0.06 | Stabilizing | 0.726 | D | 0.643 | neutral | None | None | None | None | N |
L/F | 0.1775 | likely_benign | 0.1367 | benign | -0.752 | Destabilizing | 0.497 | N | 0.505 | neutral | N | 0.499087751 | None | None | N |
L/G | 0.5584 | ambiguous | 0.4942 | ambiguous | -1.34 | Destabilizing | 0.726 | D | 0.637 | neutral | None | None | None | None | N |
L/H | 0.2877 | likely_benign | 0.2185 | benign | -0.423 | Destabilizing | 0.958 | D | 0.653 | neutral | N | 0.51167026 | None | None | N |
L/I | 0.0668 | likely_benign | 0.0624 | benign | -0.475 | Destabilizing | None | N | 0.097 | neutral | N | 0.429881169 | None | None | N |
L/K | 0.3174 | likely_benign | 0.2698 | benign | -0.484 | Destabilizing | 0.726 | D | 0.611 | neutral | None | None | None | None | N |
L/M | 0.1182 | likely_benign | 0.108 | benign | -0.557 | Destabilizing | 0.567 | D | 0.546 | neutral | None | None | None | None | N |
L/N | 0.3223 | likely_benign | 0.2805 | benign | -0.356 | Destabilizing | 0.89 | D | 0.644 | neutral | None | None | None | None | N |
L/P | 0.5585 | ambiguous | 0.4681 | ambiguous | -0.643 | Destabilizing | 0.859 | D | 0.644 | neutral | N | 0.519481666 | None | None | N |
L/Q | 0.1887 | likely_benign | 0.1517 | benign | -0.48 | Destabilizing | 0.89 | D | 0.613 | neutral | None | None | None | None | N |
L/R | 0.2902 | likely_benign | 0.2189 | benign | 0.007 | Stabilizing | 0.667 | D | 0.618 | neutral | N | 0.462201445 | None | None | N |
L/S | 0.3374 | likely_benign | 0.2844 | benign | -1.023 | Destabilizing | 0.726 | D | 0.535 | neutral | None | None | None | None | N |
L/T | 0.2451 | likely_benign | 0.2158 | benign | -0.91 | Destabilizing | 0.272 | N | 0.527 | neutral | None | None | None | None | N |
L/V | 0.0971 | likely_benign | 0.0839 | benign | -0.643 | Destabilizing | 0.004 | N | 0.138 | neutral | N | 0.456123621 | None | None | N |
L/W | 0.4344 | ambiguous | 0.3198 | benign | -0.738 | Destabilizing | 0.968 | D | 0.685 | prob.neutral | None | None | None | None | N |
L/Y | 0.3977 | ambiguous | 0.3142 | benign | -0.507 | Destabilizing | 0.726 | D | 0.576 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.