Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18546 | 55861;55862;55863 | chr2:178601361;178601360;178601359 | chr2:179466088;179466087;179466086 |
N2AB | 16905 | 50938;50939;50940 | chr2:178601361;178601360;178601359 | chr2:179466088;179466087;179466086 |
N2A | 15978 | 48157;48158;48159 | chr2:178601361;178601360;178601359 | chr2:179466088;179466087;179466086 |
N2B | 9481 | 28666;28667;28668 | chr2:178601361;178601360;178601359 | chr2:179466088;179466087;179466086 |
Novex-1 | 9606 | 29041;29042;29043 | chr2:178601361;178601360;178601359 | chr2:179466088;179466087;179466086 |
Novex-2 | 9673 | 29242;29243;29244 | chr2:178601361;178601360;178601359 | chr2:179466088;179466087;179466086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.001 | N | 0.213 | 0.101 | 0.17948927462 | gnomAD-4.0.0 | 1.59393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43554E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2107 | likely_benign | 0.1665 | benign | -0.404 | Destabilizing | 0.005 | N | 0.397 | neutral | N | 0.408908464 | None | None | N |
E/C | 0.7916 | likely_pathogenic | 0.7414 | pathogenic | 0.084 | Stabilizing | 0.864 | D | 0.577 | neutral | None | None | None | None | N |
E/D | 0.0844 | likely_benign | 0.0793 | benign | -0.381 | Destabilizing | 0.024 | N | 0.412 | neutral | N | 0.398787471 | None | None | N |
E/F | 0.8052 | likely_pathogenic | 0.7484 | pathogenic | -0.439 | Destabilizing | 0.628 | D | 0.601 | neutral | None | None | None | None | N |
E/G | 0.0865 | likely_benign | 0.063 | benign | -0.614 | Destabilizing | None | N | 0.323 | neutral | N | 0.272143165 | None | None | N |
E/H | 0.4284 | ambiguous | 0.3738 | ambiguous | -0.437 | Destabilizing | 0.356 | N | 0.432 | neutral | None | None | None | None | N |
E/I | 0.6316 | likely_pathogenic | 0.546 | ambiguous | 0.114 | Stabilizing | 0.356 | N | 0.603 | neutral | None | None | None | None | N |
E/K | 0.2072 | likely_benign | 0.1623 | benign | 0.203 | Stabilizing | 0.012 | N | 0.406 | neutral | N | 0.422107048 | None | None | N |
E/L | 0.5001 | ambiguous | 0.4178 | ambiguous | 0.114 | Stabilizing | 0.072 | N | 0.613 | neutral | None | None | None | None | N |
E/M | 0.5736 | likely_pathogenic | 0.4934 | ambiguous | 0.366 | Stabilizing | 0.356 | N | 0.572 | neutral | None | None | None | None | N |
E/N | 0.1623 | likely_benign | 0.1506 | benign | 0.039 | Stabilizing | 0.072 | N | 0.353 | neutral | None | None | None | None | N |
E/P | 0.6866 | likely_pathogenic | 0.6003 | pathogenic | -0.038 | Destabilizing | 0.136 | N | 0.525 | neutral | None | None | None | None | N |
E/Q | 0.1506 | likely_benign | 0.126 | benign | 0.053 | Stabilizing | 0.001 | N | 0.213 | neutral | N | 0.43043853 | None | None | N |
E/R | 0.3129 | likely_benign | 0.2453 | benign | 0.315 | Stabilizing | 0.038 | N | 0.347 | neutral | None | None | None | None | N |
E/S | 0.1509 | likely_benign | 0.1296 | benign | -0.171 | Destabilizing | 0.016 | N | 0.395 | neutral | None | None | None | None | N |
E/T | 0.2625 | likely_benign | 0.2217 | benign | -0.011 | Destabilizing | 0.072 | N | 0.514 | neutral | None | None | None | None | N |
E/V | 0.4433 | ambiguous | 0.3643 | ambiguous | -0.038 | Destabilizing | 0.055 | N | 0.585 | neutral | N | 0.460318719 | None | None | N |
E/W | 0.9111 | likely_pathogenic | 0.859 | pathogenic | -0.345 | Destabilizing | 0.864 | D | 0.577 | neutral | None | None | None | None | N |
E/Y | 0.638 | likely_pathogenic | 0.5752 | pathogenic | -0.212 | Destabilizing | 0.356 | N | 0.586 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.