Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18556 | 55891;55892;55893 | chr2:178601331;178601330;178601329 | chr2:179466058;179466057;179466056 |
N2AB | 16915 | 50968;50969;50970 | chr2:178601331;178601330;178601329 | chr2:179466058;179466057;179466056 |
N2A | 15988 | 48187;48188;48189 | chr2:178601331;178601330;178601329 | chr2:179466058;179466057;179466056 |
N2B | 9491 | 28696;28697;28698 | chr2:178601331;178601330;178601329 | chr2:179466058;179466057;179466056 |
Novex-1 | 9616 | 29071;29072;29073 | chr2:178601331;178601330;178601329 | chr2:179466058;179466057;179466056 |
Novex-2 | 9683 | 29272;29273;29274 | chr2:178601331;178601330;178601329 | chr2:179466058;179466057;179466056 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.865 | N | 0.466 | 0.27 | 0.265929055128 | gnomAD-4.0.0 | 3.20575E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.76356E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2064 | likely_benign | 0.1803 | benign | -1.248 | Destabilizing | 0.865 | D | 0.575 | neutral | N | 0.466707522 | None | None | N |
E/C | 0.7688 | likely_pathogenic | 0.7461 | pathogenic | -0.957 | Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
E/D | 0.6216 | likely_pathogenic | 0.6325 | pathogenic | -1.549 | Destabilizing | 0.928 | D | 0.435 | neutral | N | 0.519756521 | None | None | N |
E/F | 0.8187 | likely_pathogenic | 0.7967 | pathogenic | -1.371 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
E/G | 0.3868 | ambiguous | 0.34 | ambiguous | -1.591 | Destabilizing | 0.978 | D | 0.749 | deleterious | N | 0.490131376 | None | None | N |
E/H | 0.6216 | likely_pathogenic | 0.5949 | pathogenic | -1.512 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/I | 0.334 | likely_benign | 0.3063 | benign | -0.299 | Destabilizing | 0.992 | D | 0.882 | deleterious | None | None | None | None | N |
E/K | 0.1993 | likely_benign | 0.1613 | benign | -1.291 | Destabilizing | 0.865 | D | 0.466 | neutral | N | 0.468544401 | None | None | N |
E/L | 0.5445 | ambiguous | 0.4894 | ambiguous | -0.299 | Destabilizing | 0.983 | D | 0.837 | deleterious | None | None | None | None | N |
E/M | 0.4507 | ambiguous | 0.4122 | ambiguous | 0.258 | Stabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
E/N | 0.5552 | ambiguous | 0.5535 | ambiguous | -1.466 | Destabilizing | 0.983 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/P | 0.9911 | likely_pathogenic | 0.9895 | pathogenic | -0.597 | Destabilizing | 0.992 | D | 0.839 | deleterious | None | None | None | None | N |
E/Q | 0.1013 | likely_benign | 0.0922 | benign | -1.285 | Destabilizing | 0.284 | N | 0.233 | neutral | N | 0.464986002 | None | None | N |
E/R | 0.3004 | likely_benign | 0.2536 | benign | -1.221 | Destabilizing | 0.968 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/S | 0.2968 | likely_benign | 0.2846 | benign | -2.03 | Highly Destabilizing | 0.895 | D | 0.521 | neutral | None | None | None | None | N |
E/T | 0.2847 | likely_benign | 0.2775 | benign | -1.712 | Destabilizing | 0.983 | D | 0.758 | deleterious | None | None | None | None | N |
E/V | 0.1839 | likely_benign | 0.1611 | benign | -0.597 | Destabilizing | 0.978 | D | 0.829 | deleterious | N | 0.461233078 | None | None | N |
E/W | 0.9424 | likely_pathogenic | 0.9313 | pathogenic | -1.486 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
E/Y | 0.7963 | likely_pathogenic | 0.7698 | pathogenic | -1.196 | Destabilizing | 0.992 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.