Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18559 | 55900;55901;55902 | chr2:178601322;178601321;178601320 | chr2:179466049;179466048;179466047 |
N2AB | 16918 | 50977;50978;50979 | chr2:178601322;178601321;178601320 | chr2:179466049;179466048;179466047 |
N2A | 15991 | 48196;48197;48198 | chr2:178601322;178601321;178601320 | chr2:179466049;179466048;179466047 |
N2B | 9494 | 28705;28706;28707 | chr2:178601322;178601321;178601320 | chr2:179466049;179466048;179466047 |
Novex-1 | 9619 | 29080;29081;29082 | chr2:178601322;178601321;178601320 | chr2:179466049;179466048;179466047 |
Novex-2 | 9686 | 29281;29282;29283 | chr2:178601322;178601321;178601320 | chr2:179466049;179466048;179466047 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | None | None | 0.704 | N | 0.413 | 0.213 | 0.481915485015 | gnomAD-4.0.0 | 1.60617E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88947E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7653 | likely_pathogenic | 0.7412 | pathogenic | -1.115 | Destabilizing | 0.927 | D | 0.485 | neutral | None | None | None | None | I |
F/C | 0.3733 | ambiguous | 0.3506 | ambiguous | -0.337 | Destabilizing | 0.999 | D | 0.542 | neutral | N | 0.472207794 | None | None | I |
F/D | 0.9193 | likely_pathogenic | 0.9231 | pathogenic | 0.564 | Stabilizing | 0.964 | D | 0.53 | neutral | None | None | None | None | I |
F/E | 0.9207 | likely_pathogenic | 0.9269 | pathogenic | 0.548 | Stabilizing | 0.982 | D | 0.531 | neutral | None | None | None | None | I |
F/G | 0.8802 | likely_pathogenic | 0.8883 | pathogenic | -1.324 | Destabilizing | 0.939 | D | 0.519 | neutral | None | None | None | None | I |
F/H | 0.5232 | ambiguous | 0.5545 | ambiguous | 0.127 | Stabilizing | 0.991 | D | 0.485 | neutral | None | None | None | None | I |
F/I | 0.4672 | ambiguous | 0.4236 | ambiguous | -0.572 | Destabilizing | 0.852 | D | 0.324 | neutral | N | 0.428166229 | None | None | I |
F/K | 0.9312 | likely_pathogenic | 0.9385 | pathogenic | -0.19 | Destabilizing | 0.939 | D | 0.525 | neutral | None | None | None | None | I |
F/L | 0.9002 | likely_pathogenic | 0.8906 | pathogenic | -0.572 | Destabilizing | 0.015 | N | 0.177 | neutral | N | 0.439634016 | None | None | I |
F/M | 0.667 | likely_pathogenic | 0.6524 | pathogenic | -0.421 | Destabilizing | 0.982 | D | 0.383 | neutral | None | None | None | None | I |
F/N | 0.6854 | likely_pathogenic | 0.7255 | pathogenic | -0.133 | Destabilizing | 0.17 | N | 0.41 | neutral | None | None | None | None | I |
F/P | 0.9951 | likely_pathogenic | 0.9947 | pathogenic | -0.735 | Destabilizing | 0.997 | D | 0.545 | neutral | None | None | None | None | I |
F/Q | 0.8497 | likely_pathogenic | 0.8521 | pathogenic | -0.211 | Destabilizing | 0.991 | D | 0.547 | neutral | None | None | None | None | I |
F/R | 0.8704 | likely_pathogenic | 0.8756 | pathogenic | 0.328 | Stabilizing | 0.991 | D | 0.548 | neutral | None | None | None | None | I |
F/S | 0.6603 | likely_pathogenic | 0.6327 | pathogenic | -0.821 | Destabilizing | 0.92 | D | 0.515 | neutral | N | 0.48167264 | None | None | I |
F/T | 0.7979 | likely_pathogenic | 0.7872 | pathogenic | -0.744 | Destabilizing | 0.939 | D | 0.507 | neutral | None | None | None | None | I |
F/V | 0.4695 | ambiguous | 0.4267 | ambiguous | -0.735 | Destabilizing | 0.704 | D | 0.413 | neutral | N | 0.42443249 | None | None | I |
F/W | 0.4231 | ambiguous | 0.4479 | ambiguous | -0.353 | Destabilizing | 0.999 | D | 0.431 | neutral | None | None | None | None | I |
F/Y | 0.1426 | likely_benign | 0.1533 | benign | -0.353 | Destabilizing | 0.986 | D | 0.365 | neutral | N | 0.445194551 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.