Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1856 | 5791;5792;5793 | chr2:178776298;178776297;178776296 | chr2:179641025;179641024;179641023 |
N2AB | 1856 | 5791;5792;5793 | chr2:178776298;178776297;178776296 | chr2:179641025;179641024;179641023 |
N2A | 1856 | 5791;5792;5793 | chr2:178776298;178776297;178776296 | chr2:179641025;179641024;179641023 |
N2B | 1810 | 5653;5654;5655 | chr2:178776298;178776297;178776296 | chr2:179641025;179641024;179641023 |
Novex-1 | 1810 | 5653;5654;5655 | chr2:178776298;178776297;178776296 | chr2:179641025;179641024;179641023 |
Novex-2 | 1810 | 5653;5654;5655 | chr2:178776298;178776297;178776296 | chr2:179641025;179641024;179641023 |
Novex-3 | 1856 | 5791;5792;5793 | chr2:178776298;178776297;178776296 | chr2:179641025;179641024;179641023 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1315454944 | None | 0.896 | N | 0.383 | 0.191 | 0.156986980423 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1315454944 | None | 0.896 | N | 0.383 | 0.191 | 0.156986980423 | gnomAD-4.0.0 | 1.05332E-05 | None | None | None | None | N | None | 1.33483E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35593E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7235 | likely_pathogenic | 0.7054 | pathogenic | -0.575 | Destabilizing | 0.896 | D | 0.357 | neutral | N | 0.422689735 | None | None | N |
E/C | 0.99 | likely_pathogenic | 0.9889 | pathogenic | -0.049 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
E/D | 0.2776 | likely_benign | 0.2995 | benign | -0.56 | Destabilizing | 0.011 | N | 0.155 | neutral | N | 0.425115529 | None | None | N |
E/F | 0.9875 | likely_pathogenic | 0.9867 | pathogenic | -0.447 | Destabilizing | 0.996 | D | 0.535 | neutral | None | None | None | None | N |
E/G | 0.6619 | likely_pathogenic | 0.6317 | pathogenic | -0.81 | Destabilizing | 0.896 | D | 0.403 | neutral | N | 0.42625852 | None | None | N |
E/H | 0.9445 | likely_pathogenic | 0.9403 | pathogenic | -0.44 | Destabilizing | 0.988 | D | 0.345 | neutral | None | None | None | None | N |
E/I | 0.9554 | likely_pathogenic | 0.9569 | pathogenic | 0.023 | Stabilizing | 0.988 | D | 0.532 | neutral | None | None | None | None | N |
E/K | 0.7708 | likely_pathogenic | 0.7554 | pathogenic | 0.136 | Stabilizing | 0.896 | D | 0.383 | neutral | N | 0.426106871 | None | None | N |
E/L | 0.953 | likely_pathogenic | 0.9498 | pathogenic | 0.023 | Stabilizing | 0.988 | D | 0.475 | neutral | None | None | None | None | N |
E/M | 0.9326 | likely_pathogenic | 0.9296 | pathogenic | 0.309 | Stabilizing | 0.999 | D | 0.498 | neutral | None | None | None | None | N |
E/N | 0.7088 | likely_pathogenic | 0.7154 | pathogenic | -0.206 | Destabilizing | 0.132 | N | 0.269 | neutral | None | None | None | None | N |
E/P | 0.9978 | likely_pathogenic | 0.9971 | pathogenic | -0.155 | Destabilizing | 0.988 | D | 0.347 | neutral | None | None | None | None | N |
E/Q | 0.5491 | ambiguous | 0.5222 | ambiguous | -0.168 | Destabilizing | 0.946 | D | 0.394 | neutral | N | 0.42979175 | None | None | N |
E/R | 0.8731 | likely_pathogenic | 0.8596 | pathogenic | 0.294 | Stabilizing | 0.988 | D | 0.351 | neutral | None | None | None | None | N |
E/S | 0.7135 | likely_pathogenic | 0.6928 | pathogenic | -0.387 | Destabilizing | 0.919 | D | 0.35 | neutral | None | None | None | None | N |
E/T | 0.8364 | likely_pathogenic | 0.8368 | pathogenic | -0.196 | Destabilizing | 0.919 | D | 0.392 | neutral | None | None | None | None | N |
E/V | 0.8689 | likely_pathogenic | 0.8688 | pathogenic | -0.155 | Destabilizing | 0.984 | D | 0.438 | neutral | N | 0.469850242 | None | None | N |
E/W | 0.9972 | likely_pathogenic | 0.9968 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
E/Y | 0.9724 | likely_pathogenic | 0.9722 | pathogenic | -0.201 | Destabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.