Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18561 | 55906;55907;55908 | chr2:178601316;178601315;178601314 | chr2:179466043;179466042;179466041 |
N2AB | 16920 | 50983;50984;50985 | chr2:178601316;178601315;178601314 | chr2:179466043;179466042;179466041 |
N2A | 15993 | 48202;48203;48204 | chr2:178601316;178601315;178601314 | chr2:179466043;179466042;179466041 |
N2B | 9496 | 28711;28712;28713 | chr2:178601316;178601315;178601314 | chr2:179466043;179466042;179466041 |
Novex-1 | 9621 | 29086;29087;29088 | chr2:178601316;178601315;178601314 | chr2:179466043;179466042;179466041 |
Novex-2 | 9688 | 29287;29288;29289 | chr2:178601316;178601315;178601314 | chr2:179466043;179466042;179466041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1327467989 | -1.127 | None | N | 0.204 | 0.036 | 0.132336055621 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1327467989 | -1.127 | None | N | 0.204 | 0.036 | 0.132336055621 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1327467989 | -1.127 | None | N | 0.204 | 0.036 | 0.132336055621 | gnomAD-4.0.0 | 6.57696E-06 | None | None | None | None | I | None | 2.41289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1311 | likely_benign | 0.1145 | benign | -1.396 | Destabilizing | 0.035 | N | 0.528 | neutral | None | None | None | None | I |
I/C | 0.3794 | ambiguous | 0.3729 | ambiguous | -0.909 | Destabilizing | 0.824 | D | 0.563 | neutral | None | None | None | None | I |
I/D | 0.546 | ambiguous | 0.4856 | ambiguous | -0.673 | Destabilizing | 0.38 | N | 0.599 | neutral | None | None | None | None | I |
I/E | 0.3994 | ambiguous | 0.3565 | ambiguous | -0.712 | Destabilizing | 0.38 | N | 0.6 | neutral | None | None | None | None | I |
I/F | 0.1512 | likely_benign | 0.1126 | benign | -1.043 | Destabilizing | None | N | 0.207 | neutral | N | 0.442925037 | None | None | I |
I/G | 0.4193 | ambiguous | 0.3429 | ambiguous | -1.664 | Destabilizing | 0.149 | N | 0.597 | neutral | None | None | None | None | I |
I/H | 0.3785 | ambiguous | 0.3399 | benign | -0.733 | Destabilizing | 0.935 | D | 0.616 | neutral | None | None | None | None | I |
I/K | 0.2923 | likely_benign | 0.2488 | benign | -0.817 | Destabilizing | 0.38 | N | 0.599 | neutral | None | None | None | None | I |
I/L | 0.0944 | likely_benign | 0.0846 | benign | -0.765 | Destabilizing | 0.012 | N | 0.261 | neutral | N | 0.440172734 | None | None | I |
I/M | 0.0983 | likely_benign | 0.0838 | benign | -0.614 | Destabilizing | 0.317 | N | 0.579 | neutral | N | 0.469207562 | None | None | I |
I/N | 0.2172 | likely_benign | 0.1978 | benign | -0.601 | Destabilizing | 0.317 | N | 0.622 | neutral | N | 0.505722935 | None | None | I |
I/P | 0.2835 | likely_benign | 0.2568 | benign | -0.942 | Destabilizing | 0.555 | D | 0.617 | neutral | None | None | None | None | I |
I/Q | 0.2935 | likely_benign | 0.272 | benign | -0.845 | Destabilizing | 0.555 | D | 0.621 | neutral | None | None | None | None | I |
I/R | 0.2393 | likely_benign | 0.1933 | benign | -0.159 | Destabilizing | 0.555 | D | 0.618 | neutral | None | None | None | None | I |
I/S | 0.1547 | likely_benign | 0.142 | benign | -1.213 | Destabilizing | 0.062 | N | 0.557 | neutral | N | 0.470957001 | None | None | I |
I/T | 0.0834 | likely_benign | 0.0765 | benign | -1.139 | Destabilizing | 0.002 | N | 0.351 | neutral | N | 0.457489058 | None | None | I |
I/V | 0.0545 | likely_benign | 0.0535 | benign | -0.942 | Destabilizing | None | N | 0.204 | neutral | N | 0.418970742 | None | None | I |
I/W | 0.695 | likely_pathogenic | 0.5834 | pathogenic | -1.014 | Destabilizing | 0.935 | D | 0.618 | neutral | None | None | None | None | I |
I/Y | 0.4123 | ambiguous | 0.3595 | ambiguous | -0.808 | Destabilizing | 0.081 | N | 0.552 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.