Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18569 | 55930;55931;55932 | chr2:178601292;178601291;178601290 | chr2:179466019;179466018;179466017 |
N2AB | 16928 | 51007;51008;51009 | chr2:178601292;178601291;178601290 | chr2:179466019;179466018;179466017 |
N2A | 16001 | 48226;48227;48228 | chr2:178601292;178601291;178601290 | chr2:179466019;179466018;179466017 |
N2B | 9504 | 28735;28736;28737 | chr2:178601292;178601291;178601290 | chr2:179466019;179466018;179466017 |
Novex-1 | 9629 | 29110;29111;29112 | chr2:178601292;178601291;178601290 | chr2:179466019;179466018;179466017 |
Novex-2 | 9696 | 29311;29312;29313 | chr2:178601292;178601291;178601290 | chr2:179466019;179466018;179466017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.915 | N | 0.495 | 0.26 | 0.256283259241 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3098 | likely_benign | 0.3167 | benign | -0.016 | Destabilizing | 0.594 | D | 0.314 | neutral | None | None | None | None | N |
Q/C | 0.8441 | likely_pathogenic | 0.8021 | pathogenic | -0.183 | Destabilizing | 0.998 | D | 0.43 | neutral | None | None | None | None | N |
Q/D | 0.6022 | likely_pathogenic | 0.5965 | pathogenic | -0.011 | Destabilizing | 0.594 | D | 0.337 | neutral | None | None | None | None | N |
Q/E | 0.1127 | likely_benign | 0.1097 | benign | -0.054 | Destabilizing | 0.01 | N | 0.056 | neutral | N | 0.341717893 | None | None | N |
Q/F | 0.8314 | likely_pathogenic | 0.8256 | pathogenic | -0.436 | Destabilizing | 0.994 | D | 0.521 | neutral | None | None | None | None | N |
Q/G | 0.4355 | ambiguous | 0.4155 | ambiguous | -0.121 | Destabilizing | 0.745 | D | 0.405 | neutral | None | None | None | None | N |
Q/H | 0.4466 | ambiguous | 0.4362 | ambiguous | 0.146 | Stabilizing | 0.991 | D | 0.373 | neutral | N | 0.501583765 | None | None | N |
Q/I | 0.5022 | ambiguous | 0.5254 | ambiguous | 0.16 | Stabilizing | 0.981 | D | 0.585 | neutral | None | None | None | None | N |
Q/K | 0.2243 | likely_benign | 0.212 | benign | 0.042 | Stabilizing | 0.688 | D | 0.38 | neutral | N | 0.457523557 | None | None | N |
Q/L | 0.2416 | likely_benign | 0.2411 | benign | 0.16 | Stabilizing | 0.915 | D | 0.447 | neutral | N | 0.500196898 | None | None | N |
Q/M | 0.4695 | ambiguous | 0.5036 | ambiguous | 0.002 | Stabilizing | 0.994 | D | 0.372 | neutral | None | None | None | None | N |
Q/N | 0.4426 | ambiguous | 0.4877 | ambiguous | -0.288 | Destabilizing | 0.876 | D | 0.337 | neutral | None | None | None | None | N |
Q/P | 0.5501 | ambiguous | 0.4344 | ambiguous | 0.125 | Stabilizing | 0.915 | D | 0.495 | neutral | N | 0.449058789 | None | None | N |
Q/R | 0.2554 | likely_benign | 0.2191 | benign | 0.238 | Stabilizing | 0.842 | D | 0.41 | neutral | N | 0.445037049 | None | None | N |
Q/S | 0.3113 | likely_benign | 0.3391 | benign | -0.264 | Destabilizing | 0.216 | N | 0.123 | neutral | None | None | None | None | N |
Q/T | 0.2592 | likely_benign | 0.2957 | benign | -0.182 | Destabilizing | 0.78 | D | 0.413 | neutral | None | None | None | None | N |
Q/V | 0.3283 | likely_benign | 0.36 | ambiguous | 0.125 | Stabilizing | 0.935 | D | 0.452 | neutral | None | None | None | None | N |
Q/W | 0.8364 | likely_pathogenic | 0.7826 | pathogenic | -0.534 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
Q/Y | 0.6986 | likely_pathogenic | 0.6948 | pathogenic | -0.222 | Destabilizing | 0.994 | D | 0.479 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.