Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1857 | 5794;5795;5796 | chr2:178776295;178776294;178776293 | chr2:179641022;179641021;179641020 |
N2AB | 1857 | 5794;5795;5796 | chr2:178776295;178776294;178776293 | chr2:179641022;179641021;179641020 |
N2A | 1857 | 5794;5795;5796 | chr2:178776295;178776294;178776293 | chr2:179641022;179641021;179641020 |
N2B | 1811 | 5656;5657;5658 | chr2:178776295;178776294;178776293 | chr2:179641022;179641021;179641020 |
Novex-1 | 1811 | 5656;5657;5658 | chr2:178776295;178776294;178776293 | chr2:179641022;179641021;179641020 |
Novex-2 | 1811 | 5656;5657;5658 | chr2:178776295;178776294;178776293 | chr2:179641022;179641021;179641020 |
Novex-3 | 1857 | 5794;5795;5796 | chr2:178776295;178776294;178776293 | chr2:179641022;179641021;179641020 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.995 | N | 0.448 | 0.276 | 0.395745362164 | gnomAD-4.0.0 | 1.59067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1635 | likely_benign | 0.156 | benign | -0.7 | Destabilizing | 0.78 | D | 0.364 | neutral | N | 0.514335542 | None | None | N |
T/C | 0.7373 | likely_pathogenic | 0.7451 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | N |
T/D | 0.8358 | likely_pathogenic | 0.8077 | pathogenic | -0.412 | Destabilizing | 0.996 | D | 0.466 | neutral | None | None | None | None | N |
T/E | 0.7411 | likely_pathogenic | 0.6911 | pathogenic | -0.433 | Destabilizing | 0.996 | D | 0.455 | neutral | None | None | None | None | N |
T/F | 0.6674 | likely_pathogenic | 0.6568 | pathogenic | -0.8 | Destabilizing | 0.976 | D | 0.573 | neutral | None | None | None | None | N |
T/G | 0.4662 | ambiguous | 0.4425 | ambiguous | -0.942 | Destabilizing | 0.996 | D | 0.467 | neutral | None | None | None | None | N |
T/H | 0.6575 | likely_pathogenic | 0.6239 | pathogenic | -1.238 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
T/I | 0.3803 | ambiguous | 0.3578 | ambiguous | -0.15 | Destabilizing | 0.011 | N | 0.21 | neutral | N | 0.511816535 | None | None | N |
T/K | 0.6586 | likely_pathogenic | 0.6073 | pathogenic | -0.812 | Destabilizing | 0.988 | D | 0.462 | neutral | None | None | None | None | N |
T/L | 0.2513 | likely_benign | 0.244 | benign | -0.15 | Destabilizing | 0.702 | D | 0.403 | neutral | None | None | None | None | N |
T/M | 0.1504 | likely_benign | 0.1496 | benign | 0.213 | Stabilizing | 0.976 | D | 0.543 | neutral | None | None | None | None | N |
T/N | 0.2723 | likely_benign | 0.2667 | benign | -0.675 | Destabilizing | 0.995 | D | 0.448 | neutral | N | 0.514599138 | None | None | N |
T/P | 0.221 | likely_benign | 0.212 | benign | -0.301 | Destabilizing | 0.995 | D | 0.511 | neutral | N | 0.504945413 | None | None | N |
T/Q | 0.5602 | ambiguous | 0.5282 | ambiguous | -0.89 | Destabilizing | 0.996 | D | 0.53 | neutral | None | None | None | None | N |
T/R | 0.6171 | likely_pathogenic | 0.5645 | pathogenic | -0.503 | Destabilizing | 0.996 | D | 0.53 | neutral | None | None | None | None | N |
T/S | 0.2251 | likely_benign | 0.2197 | benign | -0.903 | Destabilizing | 0.946 | D | 0.383 | neutral | N | 0.502034905 | None | None | N |
T/V | 0.2628 | likely_benign | 0.2521 | benign | -0.301 | Destabilizing | 0.507 | D | 0.317 | neutral | None | None | None | None | N |
T/W | 0.9056 | likely_pathogenic | 0.8976 | pathogenic | -0.749 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
T/Y | 0.707 | likely_pathogenic | 0.6944 | pathogenic | -0.53 | Destabilizing | 0.996 | D | 0.594 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.