Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18574 | 55945;55946;55947 | chr2:178601277;178601276;178601275 | chr2:179466004;179466003;179466002 |
N2AB | 16933 | 51022;51023;51024 | chr2:178601277;178601276;178601275 | chr2:179466004;179466003;179466002 |
N2A | 16006 | 48241;48242;48243 | chr2:178601277;178601276;178601275 | chr2:179466004;179466003;179466002 |
N2B | 9509 | 28750;28751;28752 | chr2:178601277;178601276;178601275 | chr2:179466004;179466003;179466002 |
Novex-1 | 9634 | 29125;29126;29127 | chr2:178601277;178601276;178601275 | chr2:179466004;179466003;179466002 |
Novex-2 | 9701 | 29326;29327;29328 | chr2:178601277;178601276;178601275 | chr2:179466004;179466003;179466002 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs2053379995 | None | 0.999 | N | 0.656 | 0.266 | 0.383590876969 | gnomAD-4.0.0 | 1.23239E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.98323E-04 | None | 0 | 0 | 0 | 0 | 0 |
R/S | None | None | 0.999 | N | 0.721 | 0.223 | 0.248417906384 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6399 | likely_pathogenic | 0.5973 | pathogenic | -0.527 | Destabilizing | 0.998 | D | 0.55 | neutral | None | None | None | None | N |
R/C | 0.3426 | ambiguous | 0.2758 | benign | -0.394 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
R/D | 0.9267 | likely_pathogenic | 0.9163 | pathogenic | -0.047 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
R/E | 0.6097 | likely_pathogenic | 0.56 | ambiguous | 0.048 | Stabilizing | 0.998 | D | 0.654 | prob.neutral | None | None | None | None | N |
R/F | 0.8207 | likely_pathogenic | 0.8017 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
R/G | 0.6047 | likely_pathogenic | 0.5764 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.656 | prob.neutral | N | 0.484016725 | None | None | N |
R/H | 0.2036 | likely_benign | 0.1942 | benign | -1.233 | Destabilizing | 0.999 | D | 0.737 | deleterious | None | None | None | None | N |
R/I | 0.4885 | ambiguous | 0.4341 | ambiguous | 0.199 | Stabilizing | 0.999 | D | 0.82 | deleterious | N | 0.510144533 | None | None | N |
R/K | 0.1155 | likely_benign | 0.1187 | benign | -0.557 | Destabilizing | 0.994 | D | 0.567 | neutral | N | 0.448538714 | None | None | N |
R/L | 0.5006 | ambiguous | 0.4705 | ambiguous | 0.199 | Stabilizing | 0.999 | D | 0.656 | prob.neutral | None | None | None | None | N |
R/M | 0.497 | ambiguous | 0.481 | ambiguous | -0.042 | Destabilizing | 1.0 | D | 0.737 | deleterious | None | None | None | None | N |
R/N | 0.8418 | likely_pathogenic | 0.825 | pathogenic | 0.013 | Stabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
R/P | 0.9743 | likely_pathogenic | 0.9748 | pathogenic | -0.021 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
R/Q | 0.159 | likely_benign | 0.1413 | benign | -0.199 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
R/S | 0.7367 | likely_pathogenic | 0.7034 | pathogenic | -0.643 | Destabilizing | 0.999 | D | 0.721 | deleterious | N | 0.458350276 | None | None | N |
R/T | 0.4244 | ambiguous | 0.3891 | ambiguous | -0.384 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.493348284 | None | None | N |
R/V | 0.5149 | ambiguous | 0.4581 | ambiguous | -0.021 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
R/W | 0.451 | ambiguous | 0.4112 | ambiguous | -0.313 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
R/Y | 0.7335 | likely_pathogenic | 0.6996 | pathogenic | 0.026 | Stabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.