Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18586 | 55981;55982;55983 | chr2:178601148;178601147;178601146 | chr2:179465875;179465874;179465873 |
N2AB | 16945 | 51058;51059;51060 | chr2:178601148;178601147;178601146 | chr2:179465875;179465874;179465873 |
N2A | 16018 | 48277;48278;48279 | chr2:178601148;178601147;178601146 | chr2:179465875;179465874;179465873 |
N2B | 9521 | 28786;28787;28788 | chr2:178601148;178601147;178601146 | chr2:179465875;179465874;179465873 |
Novex-1 | 9646 | 29161;29162;29163 | chr2:178601148;178601147;178601146 | chr2:179465875;179465874;179465873 |
Novex-2 | 9713 | 29362;29363;29364 | chr2:178601148;178601147;178601146 | chr2:179465875;179465874;179465873 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs773983711 | -1.595 | 0.999 | N | 0.844 | 0.319 | 0.58308304948 | gnomAD-2.1.1 | 5.25E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.08E-05 | 0 |
L/F | rs773983711 | -1.595 | 0.999 | N | 0.844 | 0.319 | 0.58308304948 | gnomAD-4.0.0 | 7.18266E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.24618E-07 | 0 | 0 |
L/I | None | None | 0.962 | N | 0.688 | 0.192 | 0.432379865206 | gnomAD-4.0.0 | 1.43653E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.84924E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9308 | likely_pathogenic | 0.8571 | pathogenic | -2.489 | Highly Destabilizing | 0.994 | D | 0.684 | prob.neutral | None | None | None | None | N |
L/C | 0.887 | likely_pathogenic | 0.8247 | pathogenic | -1.921 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
L/D | 0.9985 | likely_pathogenic | 0.9969 | pathogenic | -2.861 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/E | 0.9911 | likely_pathogenic | 0.9818 | pathogenic | -2.663 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
L/F | 0.8105 | likely_pathogenic | 0.7698 | pathogenic | -1.446 | Destabilizing | 0.999 | D | 0.844 | deleterious | N | 0.486512023 | None | None | N |
L/G | 0.9803 | likely_pathogenic | 0.9616 | pathogenic | -3.006 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9884 | likely_pathogenic | 0.9791 | pathogenic | -2.463 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.52639429 | None | None | N |
L/I | 0.236 | likely_benign | 0.1698 | benign | -1.006 | Destabilizing | 0.962 | D | 0.688 | prob.neutral | N | 0.515796361 | None | None | N |
L/K | 0.9869 | likely_pathogenic | 0.9806 | pathogenic | -1.855 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/M | 0.3479 | ambiguous | 0.2918 | benign | -1.103 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
L/N | 0.9853 | likely_pathogenic | 0.969 | pathogenic | -2.131 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/P | 0.9115 | likely_pathogenic | 0.8294 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.869 | deleterious | N | 0.433988628 | None | None | N |
L/Q | 0.9722 | likely_pathogenic | 0.9473 | pathogenic | -2.039 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
L/R | 0.9804 | likely_pathogenic | 0.9702 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.52639429 | None | None | N |
L/S | 0.9893 | likely_pathogenic | 0.9699 | pathogenic | -2.803 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
L/T | 0.9118 | likely_pathogenic | 0.8106 | pathogenic | -2.467 | Highly Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
L/V | 0.1855 | likely_benign | 0.1207 | benign | -1.481 | Destabilizing | 0.619 | D | 0.327 | neutral | N | 0.438890228 | None | None | N |
L/W | 0.9778 | likely_pathogenic | 0.966 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/Y | 0.9777 | likely_pathogenic | 0.9679 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.