Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18588 | 55987;55988;55989 | chr2:178601142;178601141;178601140 | chr2:179465869;179465868;179465867 |
N2AB | 16947 | 51064;51065;51066 | chr2:178601142;178601141;178601140 | chr2:179465869;179465868;179465867 |
N2A | 16020 | 48283;48284;48285 | chr2:178601142;178601141;178601140 | chr2:179465869;179465868;179465867 |
N2B | 9523 | 28792;28793;28794 | chr2:178601142;178601141;178601140 | chr2:179465869;179465868;179465867 |
Novex-1 | 9648 | 29167;29168;29169 | chr2:178601142;178601141;178601140 | chr2:179465869;179465868;179465867 |
Novex-2 | 9715 | 29368;29369;29370 | chr2:178601142;178601141;178601140 | chr2:179465869;179465868;179465867 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.81 | N | 0.574 | 0.234 | 0.265929055128 | gnomAD-4.0.0 | 7.14823E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.22006E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2816 | likely_benign | 0.303 | benign | -1.976 | Destabilizing | 0.25 | N | 0.497 | neutral | None | None | None | None | N |
I/C | 0.8043 | likely_pathogenic | 0.7947 | pathogenic | -1.37 | Destabilizing | 0.992 | D | 0.6 | neutral | None | None | None | None | N |
I/D | 0.9042 | likely_pathogenic | 0.9074 | pathogenic | -1.463 | Destabilizing | 0.972 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/E | 0.7749 | likely_pathogenic | 0.7913 | pathogenic | -1.264 | Destabilizing | 0.92 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/F | 0.2953 | likely_benign | 0.2383 | benign | -1.033 | Destabilizing | 0.681 | D | 0.576 | neutral | N | 0.516035929 | None | None | N |
I/G | 0.7964 | likely_pathogenic | 0.7982 | pathogenic | -2.482 | Highly Destabilizing | 0.92 | D | 0.695 | prob.neutral | None | None | None | None | N |
I/H | 0.8116 | likely_pathogenic | 0.8013 | pathogenic | -1.659 | Destabilizing | 0.992 | D | 0.679 | prob.neutral | None | None | None | None | N |
I/K | 0.6424 | likely_pathogenic | 0.6581 | pathogenic | -1.398 | Destabilizing | 0.92 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/L | 0.1497 | likely_benign | 0.1417 | benign | -0.554 | Destabilizing | 0.002 | N | 0.185 | neutral | N | 0.482616789 | None | None | N |
I/M | 0.1141 | likely_benign | 0.1099 | benign | -0.596 | Destabilizing | 0.81 | D | 0.574 | neutral | N | 0.47760021 | None | None | N |
I/N | 0.6036 | likely_pathogenic | 0.6135 | pathogenic | -1.662 | Destabilizing | 0.963 | D | 0.7 | prob.neutral | N | 0.486096133 | None | None | N |
I/P | 0.6247 | likely_pathogenic | 0.6346 | pathogenic | -1.004 | Destabilizing | 0.972 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/Q | 0.7102 | likely_pathogenic | 0.7227 | pathogenic | -1.518 | Destabilizing | 0.972 | D | 0.702 | prob.neutral | None | None | None | None | N |
I/R | 0.5756 | likely_pathogenic | 0.576 | pathogenic | -1.168 | Destabilizing | 0.92 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/S | 0.4731 | ambiguous | 0.4932 | ambiguous | -2.44 | Highly Destabilizing | 0.896 | D | 0.627 | neutral | N | 0.4756252 | None | None | N |
I/T | 0.1568 | likely_benign | 0.1629 | benign | -2.081 | Highly Destabilizing | 0.549 | D | 0.563 | neutral | N | 0.475878689 | None | None | N |
I/V | 0.0885 | likely_benign | 0.089 | benign | -1.004 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.424104416 | None | None | N |
I/W | 0.8535 | likely_pathogenic | 0.8126 | pathogenic | -1.248 | Destabilizing | 0.992 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/Y | 0.6789 | likely_pathogenic | 0.6582 | pathogenic | -0.955 | Destabilizing | 0.92 | D | 0.616 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.