Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18591 | 55996;55997;55998 | chr2:178601133;178601132;178601131 | chr2:179465860;179465859;179465858 |
N2AB | 16950 | 51073;51074;51075 | chr2:178601133;178601132;178601131 | chr2:179465860;179465859;179465858 |
N2A | 16023 | 48292;48293;48294 | chr2:178601133;178601132;178601131 | chr2:179465860;179465859;179465858 |
N2B | 9526 | 28801;28802;28803 | chr2:178601133;178601132;178601131 | chr2:179465860;179465859;179465858 |
Novex-1 | 9651 | 29176;29177;29178 | chr2:178601133;178601132;178601131 | chr2:179465860;179465859;179465858 |
Novex-2 | 9718 | 29377;29378;29379 | chr2:178601133;178601132;178601131 | chr2:179465860;179465859;179465858 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs890362775 | -1.318 | None | N | 0.083 | 0.08 | None | gnomAD-2.1.1 | 9.81E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.07E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4991 | ambiguous | 0.475 | ambiguous | -2.231 | Highly Destabilizing | 0.035 | N | 0.343 | neutral | None | None | None | None | N |
I/C | 0.7369 | likely_pathogenic | 0.738 | pathogenic | -1.91 | Destabilizing | 0.824 | D | 0.372 | neutral | None | None | None | None | N |
I/D | 0.9309 | likely_pathogenic | 0.915 | pathogenic | -2.13 | Highly Destabilizing | 0.555 | D | 0.449 | neutral | None | None | None | None | N |
I/E | 0.7941 | likely_pathogenic | 0.7908 | pathogenic | -2.021 | Highly Destabilizing | 0.555 | D | 0.439 | neutral | None | None | None | None | N |
I/F | 0.3876 | ambiguous | 0.3566 | ambiguous | -1.471 | Destabilizing | 0.317 | N | 0.423 | neutral | N | 0.496223592 | None | None | N |
I/G | 0.8332 | likely_pathogenic | 0.8064 | pathogenic | -2.648 | Highly Destabilizing | 0.262 | N | 0.406 | neutral | None | None | None | None | N |
I/H | 0.7619 | likely_pathogenic | 0.7605 | pathogenic | -1.875 | Destabilizing | 0.935 | D | 0.461 | neutral | None | None | None | None | N |
I/K | 0.5444 | ambiguous | 0.5767 | pathogenic | -1.584 | Destabilizing | 0.555 | D | 0.437 | neutral | None | None | None | None | N |
I/L | 0.187 | likely_benign | 0.1731 | benign | -1.09 | Destabilizing | 0.005 | N | 0.259 | neutral | N | 0.476538966 | None | None | N |
I/M | 0.1754 | likely_benign | 0.1708 | benign | -1.205 | Destabilizing | 0.317 | N | 0.462 | neutral | N | 0.509979536 | None | None | N |
I/N | 0.5429 | ambiguous | 0.5528 | ambiguous | -1.667 | Destabilizing | 0.741 | D | 0.489 | neutral | D | 0.523196762 | None | None | N |
I/P | 0.829 | likely_pathogenic | 0.8091 | pathogenic | -1.445 | Destabilizing | 0.791 | D | 0.467 | neutral | None | None | None | None | N |
I/Q | 0.6185 | likely_pathogenic | 0.6306 | pathogenic | -1.743 | Destabilizing | 0.791 | D | 0.496 | neutral | None | None | None | None | N |
I/R | 0.4751 | ambiguous | 0.5023 | ambiguous | -1.128 | Destabilizing | 0.555 | D | 0.488 | neutral | None | None | None | None | N |
I/S | 0.5088 | ambiguous | 0.4974 | ambiguous | -2.38 | Highly Destabilizing | 0.117 | N | 0.367 | neutral | N | 0.498858465 | None | None | N |
I/T | 0.2703 | likely_benign | 0.2698 | benign | -2.142 | Highly Destabilizing | 0.062 | N | 0.37 | neutral | N | 0.481195424 | None | None | N |
I/V | 0.0658 | likely_benign | 0.063 | benign | -1.445 | Destabilizing | None | N | 0.083 | neutral | N | 0.368080562 | None | None | N |
I/W | 0.9377 | likely_pathogenic | 0.9242 | pathogenic | -1.62 | Destabilizing | 0.935 | D | 0.516 | neutral | None | None | None | None | N |
I/Y | 0.7476 | likely_pathogenic | 0.7486 | pathogenic | -1.368 | Destabilizing | 0.555 | D | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.