Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18594 | 56005;56006;56007 | chr2:178601124;178601123;178601122 | chr2:179465851;179465850;179465849 |
N2AB | 16953 | 51082;51083;51084 | chr2:178601124;178601123;178601122 | chr2:179465851;179465850;179465849 |
N2A | 16026 | 48301;48302;48303 | chr2:178601124;178601123;178601122 | chr2:179465851;179465850;179465849 |
N2B | 9529 | 28810;28811;28812 | chr2:178601124;178601123;178601122 | chr2:179465851;179465850;179465849 |
Novex-1 | 9654 | 29185;29186;29187 | chr2:178601124;178601123;178601122 | chr2:179465851;179465850;179465849 |
Novex-2 | 9721 | 29386;29387;29388 | chr2:178601124;178601123;178601122 | chr2:179465851;179465850;179465849 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.928 | N | 0.397 | 0.269 | 0.146414634003 | gnomAD-4.0.0 | 1.70542E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.01998E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4043 | ambiguous | 0.3687 | ambiguous | -0.726 | Destabilizing | 0.547 | D | 0.514 | neutral | None | None | None | None | N |
N/C | 0.4994 | ambiguous | 0.4564 | ambiguous | 0.028 | Stabilizing | 0.985 | D | 0.673 | neutral | None | None | None | None | N |
N/D | 0.1308 | likely_benign | 0.1275 | benign | -0.938 | Destabilizing | 0.006 | N | 0.285 | neutral | N | 0.445157266 | None | None | N |
N/E | 0.4 | ambiguous | 0.394 | ambiguous | -0.876 | Destabilizing | 0.547 | D | 0.429 | neutral | None | None | None | None | N |
N/F | 0.7704 | likely_pathogenic | 0.7174 | pathogenic | -0.61 | Destabilizing | 0.945 | D | 0.669 | neutral | None | None | None | None | N |
N/G | 0.3389 | likely_benign | 0.2707 | benign | -1.032 | Destabilizing | 0.547 | D | 0.421 | neutral | None | None | None | None | N |
N/H | 0.1636 | likely_benign | 0.1452 | benign | -0.874 | Destabilizing | 0.928 | D | 0.397 | neutral | N | 0.514134562 | None | None | N |
N/I | 0.6794 | likely_pathogenic | 0.6531 | pathogenic | 0.036 | Stabilizing | 0.864 | D | 0.663 | neutral | N | 0.49884479 | None | None | N |
N/K | 0.3204 | likely_benign | 0.3192 | benign | -0.335 | Destabilizing | 0.477 | N | 0.461 | neutral | N | 0.509843463 | None | None | N |
N/L | 0.5746 | likely_pathogenic | 0.5528 | ambiguous | 0.036 | Stabilizing | 0.894 | D | 0.607 | neutral | None | None | None | None | N |
N/M | 0.5562 | ambiguous | 0.5259 | ambiguous | 0.595 | Stabilizing | 0.995 | D | 0.588 | neutral | None | None | None | None | N |
N/P | 0.9512 | likely_pathogenic | 0.9377 | pathogenic | -0.189 | Destabilizing | 0.894 | D | 0.6 | neutral | None | None | None | None | N |
N/Q | 0.373 | ambiguous | 0.3545 | ambiguous | -1.043 | Destabilizing | 0.894 | D | 0.429 | neutral | None | None | None | None | N |
N/R | 0.3916 | ambiguous | 0.3791 | ambiguous | -0.249 | Destabilizing | 0.894 | D | 0.432 | neutral | None | None | None | None | N |
N/S | 0.1269 | likely_benign | 0.1223 | benign | -0.858 | Destabilizing | 0.006 | N | 0.281 | neutral | N | 0.44788814 | None | None | N |
N/T | 0.1869 | likely_benign | 0.1884 | benign | -0.628 | Destabilizing | 0.477 | N | 0.431 | neutral | N | 0.46119858 | None | None | N |
N/V | 0.6225 | likely_pathogenic | 0.5984 | pathogenic | -0.189 | Destabilizing | 0.894 | D | 0.657 | neutral | None | None | None | None | N |
N/W | 0.8705 | likely_pathogenic | 0.8329 | pathogenic | -0.411 | Destabilizing | 0.995 | D | 0.65 | neutral | None | None | None | None | N |
N/Y | 0.2676 | likely_benign | 0.2379 | benign | -0.189 | Destabilizing | 0.928 | D | 0.607 | neutral | N | 0.49209684 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.