Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18602 | 56029;56030;56031 | chr2:178601100;178601099;178601098 | chr2:179465827;179465826;179465825 |
N2AB | 16961 | 51106;51107;51108 | chr2:178601100;178601099;178601098 | chr2:179465827;179465826;179465825 |
N2A | 16034 | 48325;48326;48327 | chr2:178601100;178601099;178601098 | chr2:179465827;179465826;179465825 |
N2B | 9537 | 28834;28835;28836 | chr2:178601100;178601099;178601098 | chr2:179465827;179465826;179465825 |
Novex-1 | 9662 | 29209;29210;29211 | chr2:178601100;178601099;178601098 | chr2:179465827;179465826;179465825 |
Novex-2 | 9729 | 29410;29411;29412 | chr2:178601100;178601099;178601098 | chr2:179465827;179465826;179465825 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs559554374 | -1.7 | 1.0 | N | 0.87 | 0.47 | 0.567170738818 | gnomAD-2.1.1 | 8.41E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.13572E-04 | None | 0 | None | 0 | 0 | 0 |
P/H | rs559554374 | -1.7 | 1.0 | N | 0.87 | 0.47 | 0.567170738818 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9478E-04 | None | 0 | 0 | 0 | 0 | 0 |
P/H | rs559554374 | -1.7 | 1.0 | N | 0.87 | 0.47 | 0.567170738818 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
P/H | rs559554374 | -1.7 | 1.0 | N | 0.87 | 0.47 | 0.567170738818 | gnomAD-4.0.0 | 2.60146E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.88806E-05 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs781300931 | None | 0.999 | N | 0.771 | 0.377 | 0.303781844768 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
P/S | rs781300931 | None | 0.999 | N | 0.771 | 0.377 | 0.303781844768 | gnomAD-4.0.0 | 5.61931E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.66836E-06 | 0 | 0 |
P/T | rs781300931 | -2.081 | 0.999 | N | 0.777 | 0.39 | 0.454893017966 | gnomAD-2.1.1 | 8.42E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.68E-05 | None | 0 | None | 0 | 9.29E-06 | 0 |
P/T | rs781300931 | -2.081 | 0.999 | N | 0.777 | 0.39 | 0.454893017966 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs781300931 | -2.081 | 0.999 | N | 0.777 | 0.39 | 0.454893017966 | gnomAD-4.0.0 | 1.8731E-06 | None | None | None | None | N | None | 2.6881E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.5204E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1037 | likely_benign | 0.1024 | benign | -1.932 | Destabilizing | 0.996 | D | 0.609 | neutral | N | 0.472712014 | None | None | N |
P/C | 0.7471 | likely_pathogenic | 0.6843 | pathogenic | -1.274 | Destabilizing | 0.844 | D | 0.501 | neutral | None | None | None | None | N |
P/D | 0.8443 | likely_pathogenic | 0.8085 | pathogenic | -2.687 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/E | 0.501 | ambiguous | 0.466 | ambiguous | -2.506 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
P/F | 0.7936 | likely_pathogenic | 0.6982 | pathogenic | -1.322 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/G | 0.582 | likely_pathogenic | 0.5556 | ambiguous | -2.385 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
P/H | 0.4661 | ambiguous | 0.3851 | ambiguous | -2.014 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | N | 0.489355498 | None | None | N |
P/I | 0.4796 | ambiguous | 0.4019 | ambiguous | -0.687 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/K | 0.4015 | ambiguous | 0.3705 | ambiguous | -1.781 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/L | 0.2409 | likely_benign | 0.1896 | benign | -0.687 | Destabilizing | 0.999 | D | 0.812 | deleterious | N | 0.495431884 | None | None | N |
P/M | 0.4494 | ambiguous | 0.4017 | ambiguous | -0.534 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/N | 0.7269 | likely_pathogenic | 0.6486 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
P/Q | 0.2825 | likely_benign | 0.2387 | benign | -1.977 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
P/R | 0.3232 | likely_benign | 0.2848 | benign | -1.457 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.518332447 | None | None | N |
P/S | 0.3078 | likely_benign | 0.2681 | benign | -2.526 | Highly Destabilizing | 0.999 | D | 0.771 | deleterious | N | 0.480770669 | None | None | N |
P/T | 0.2666 | likely_benign | 0.2275 | benign | -2.217 | Highly Destabilizing | 0.999 | D | 0.777 | deleterious | N | 0.484809594 | None | None | N |
P/V | 0.3318 | likely_benign | 0.2791 | benign | -1.076 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
P/W | 0.9142 | likely_pathogenic | 0.8661 | pathogenic | -1.785 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/Y | 0.7299 | likely_pathogenic | 0.6487 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.