Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18606 | 56041;56042;56043 | chr2:178601088;178601087;178601086 | chr2:179465815;179465814;179465813 |
N2AB | 16965 | 51118;51119;51120 | chr2:178601088;178601087;178601086 | chr2:179465815;179465814;179465813 |
N2A | 16038 | 48337;48338;48339 | chr2:178601088;178601087;178601086 | chr2:179465815;179465814;179465813 |
N2B | 9541 | 28846;28847;28848 | chr2:178601088;178601087;178601086 | chr2:179465815;179465814;179465813 |
Novex-1 | 9666 | 29221;29222;29223 | chr2:178601088;178601087;178601086 | chr2:179465815;179465814;179465813 |
Novex-2 | 9733 | 29422;29423;29424 | chr2:178601088;178601087;178601086 | chr2:179465815;179465814;179465813 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.543 | N | 0.261 | 0.214 | 0.250039746154 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
D/V | None | None | 0.999 | N | 0.719 | 0.567 | 0.730763679516 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9123 | likely_pathogenic | 0.932 | pathogenic | 0.101 | Stabilizing | 0.994 | D | 0.631 | neutral | N | 0.482689091 | None | None | I |
D/C | 0.9828 | likely_pathogenic | 0.9897 | pathogenic | 0.214 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/E | 0.9203 | likely_pathogenic | 0.9409 | pathogenic | -0.755 | Destabilizing | 0.989 | D | 0.51 | neutral | N | 0.482991806 | None | None | I |
D/F | 0.9838 | likely_pathogenic | 0.9878 | pathogenic | -0.402 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
D/G | 0.8975 | likely_pathogenic | 0.9167 | pathogenic | -0.162 | Destabilizing | 0.989 | D | 0.607 | neutral | N | 0.510708074 | None | None | I |
D/H | 0.9143 | likely_pathogenic | 0.9368 | pathogenic | -0.864 | Destabilizing | 0.595 | D | 0.479 | neutral | N | 0.502212151 | None | None | I |
D/I | 0.9736 | likely_pathogenic | 0.9787 | pathogenic | 0.746 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
D/K | 0.9772 | likely_pathogenic | 0.9833 | pathogenic | 0.04 | Stabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | I |
D/L | 0.9652 | likely_pathogenic | 0.9713 | pathogenic | 0.746 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/M | 0.9894 | likely_pathogenic | 0.9913 | pathogenic | 1.146 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/N | 0.3208 | likely_benign | 0.3106 | benign | -0.181 | Destabilizing | 0.543 | D | 0.261 | neutral | N | 0.507419233 | None | None | I |
D/P | 0.9811 | likely_pathogenic | 0.9866 | pathogenic | 0.557 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
D/Q | 0.9691 | likely_pathogenic | 0.9787 | pathogenic | -0.095 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
D/R | 0.9738 | likely_pathogenic | 0.9787 | pathogenic | -0.165 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
D/S | 0.6591 | likely_pathogenic | 0.6991 | pathogenic | -0.33 | Destabilizing | 0.992 | D | 0.592 | neutral | None | None | None | None | I |
D/T | 0.8322 | likely_pathogenic | 0.8679 | pathogenic | -0.121 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
D/V | 0.9353 | likely_pathogenic | 0.9487 | pathogenic | 0.557 | Stabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.501705172 | None | None | I |
D/W | 0.9958 | likely_pathogenic | 0.9969 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
D/Y | 0.8776 | likely_pathogenic | 0.9141 | pathogenic | -0.239 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | D | 0.53720612 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.