Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18611 | 56056;56057;56058 | chr2:178601073;178601072;178601071 | chr2:179465800;179465799;179465798 |
N2AB | 16970 | 51133;51134;51135 | chr2:178601073;178601072;178601071 | chr2:179465800;179465799;179465798 |
N2A | 16043 | 48352;48353;48354 | chr2:178601073;178601072;178601071 | chr2:179465800;179465799;179465798 |
N2B | 9546 | 28861;28862;28863 | chr2:178601073;178601072;178601071 | chr2:179465800;179465799;179465798 |
Novex-1 | 9671 | 29236;29237;29238 | chr2:178601073;178601072;178601071 | chr2:179465800;179465799;179465798 |
Novex-2 | 9738 | 29437;29438;29439 | chr2:178601073;178601072;178601071 | chr2:179465800;179465799;179465798 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.981 | N | 0.603 | 0.234 | 0.381071309025 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9223 | likely_pathogenic | 0.9204 | pathogenic | -1.976 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | N | 0.486994732 | None | None | I |
V/C | 0.971 | likely_pathogenic | 0.977 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
V/D | 0.995 | likely_pathogenic | 0.9966 | pathogenic | -2.646 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.504338518 | None | None | I |
V/E | 0.9857 | likely_pathogenic | 0.9882 | pathogenic | -2.524 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
V/F | 0.9486 | likely_pathogenic | 0.9553 | pathogenic | -1.361 | Destabilizing | 0.999 | D | 0.879 | deleterious | N | 0.48792933 | None | None | I |
V/G | 0.9655 | likely_pathogenic | 0.9677 | pathogenic | -2.421 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.51746925 | None | None | I |
V/H | 0.996 | likely_pathogenic | 0.997 | pathogenic | -2.192 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
V/I | 0.1016 | likely_benign | 0.0982 | benign | -0.777 | Destabilizing | 0.767 | D | 0.34 | neutral | N | 0.393608151 | None | None | I |
V/K | 0.9908 | likely_pathogenic | 0.9925 | pathogenic | -1.722 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | I |
V/L | 0.7872 | likely_pathogenic | 0.8022 | pathogenic | -0.777 | Destabilizing | 0.981 | D | 0.603 | neutral | N | 0.49121763 | None | None | I |
V/M | 0.8168 | likely_pathogenic | 0.8335 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
V/N | 0.9593 | likely_pathogenic | 0.9749 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
V/P | 0.923 | likely_pathogenic | 0.9302 | pathogenic | -1.147 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | I |
V/Q | 0.9869 | likely_pathogenic | 0.9881 | pathogenic | -1.826 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
V/R | 0.9826 | likely_pathogenic | 0.9859 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
V/S | 0.9586 | likely_pathogenic | 0.965 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | I |
V/T | 0.899 | likely_pathogenic | 0.9115 | pathogenic | -2.102 | Highly Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | I |
V/W | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
V/Y | 0.993 | likely_pathogenic | 0.995 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.