Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18613 | 56062;56063;56064 | chr2:178601067;178601066;178601065 | chr2:179465794;179465793;179465792 |
N2AB | 16972 | 51139;51140;51141 | chr2:178601067;178601066;178601065 | chr2:179465794;179465793;179465792 |
N2A | 16045 | 48358;48359;48360 | chr2:178601067;178601066;178601065 | chr2:179465794;179465793;179465792 |
N2B | 9548 | 28867;28868;28869 | chr2:178601067;178601066;178601065 | chr2:179465794;179465793;179465792 |
Novex-1 | 9673 | 29242;29243;29244 | chr2:178601067;178601066;178601065 | chr2:179465794;179465793;179465792 |
Novex-2 | 9740 | 29443;29444;29445 | chr2:178601067;178601066;178601065 | chr2:179465794;179465793;179465792 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | None | None | 1.0 | N | 0.691 | 0.497 | 0.376039117802 | gnomAD-4.0.0 | 1.59674E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43968E-05 | 0 |
H/P | None | None | 1.0 | N | 0.798 | 0.654 | 0.628066502817 | gnomAD-4.0.0 | 1.59553E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86554E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7351 | likely_pathogenic | 0.7597 | pathogenic | -1.246 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
H/C | 0.3757 | ambiguous | 0.4056 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
H/D | 0.723 | likely_pathogenic | 0.7464 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.497084809 | None | None | N |
H/E | 0.852 | likely_pathogenic | 0.8541 | pathogenic | -0.875 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
H/F | 0.763 | likely_pathogenic | 0.7759 | pathogenic | 0.309 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
H/G | 0.4853 | ambiguous | 0.5497 | ambiguous | -1.627 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
H/I | 0.97 | likely_pathogenic | 0.97 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
H/K | 0.6778 | likely_pathogenic | 0.7202 | pathogenic | -0.887 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
H/L | 0.7053 | likely_pathogenic | 0.6919 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.520673745 | None | None | N |
H/M | 0.9309 | likely_pathogenic | 0.9312 | pathogenic | -0.313 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
H/N | 0.3326 | likely_benign | 0.3443 | ambiguous | -1.19 | Destabilizing | 0.999 | D | 0.497 | neutral | N | 0.461105366 | None | None | N |
H/P | 0.9677 | likely_pathogenic | 0.974 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.493018212 | None | None | N |
H/Q | 0.6538 | likely_pathogenic | 0.6472 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.509109957 | None | None | N |
H/R | 0.3387 | likely_benign | 0.3467 | ambiguous | -1.192 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.47672818 | None | None | N |
H/S | 0.4991 | ambiguous | 0.5371 | ambiguous | -1.27 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
H/T | 0.8201 | likely_pathogenic | 0.8364 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
H/V | 0.931 | likely_pathogenic | 0.9314 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
H/W | 0.8039 | likely_pathogenic | 0.8232 | pathogenic | 0.718 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
H/Y | 0.3192 | likely_benign | 0.3276 | benign | 0.699 | Stabilizing | 0.999 | D | 0.539 | neutral | N | 0.497431526 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.