Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18615 | 56068;56069;56070 | chr2:178601061;178601060;178601059 | chr2:179465788;179465787;179465786 |
N2AB | 16974 | 51145;51146;51147 | chr2:178601061;178601060;178601059 | chr2:179465788;179465787;179465786 |
N2A | 16047 | 48364;48365;48366 | chr2:178601061;178601060;178601059 | chr2:179465788;179465787;179465786 |
N2B | 9550 | 28873;28874;28875 | chr2:178601061;178601060;178601059 | chr2:179465788;179465787;179465786 |
Novex-1 | 9675 | 29248;29249;29250 | chr2:178601061;178601060;178601059 | chr2:179465788;179465787;179465786 |
Novex-2 | 9742 | 29449;29450;29451 | chr2:178601061;178601060;178601059 | chr2:179465788;179465787;179465786 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs1474944420 | -3.104 | 0.018 | N | 0.598 | 0.197 | 0.642681104822 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/S | rs1474944420 | -3.104 | 0.018 | N | 0.598 | 0.197 | 0.642681104822 | gnomAD-4.0.0 | 3.42349E-06 | None | None | None | None | N | None | 0 | 8.95857E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65761E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4426 | ambiguous | 0.4432 | ambiguous | -2.636 | Highly Destabilizing | 0.116 | N | 0.623 | neutral | None | None | None | None | N |
I/C | 0.742 | likely_pathogenic | 0.7755 | pathogenic | -1.776 | Destabilizing | 0.981 | D | 0.665 | neutral | None | None | None | None | N |
I/D | 0.779 | likely_pathogenic | 0.8171 | pathogenic | -3.295 | Highly Destabilizing | 0.527 | D | 0.668 | neutral | None | None | None | None | N |
I/E | 0.6956 | likely_pathogenic | 0.7417 | pathogenic | -3.15 | Highly Destabilizing | 0.69 | D | 0.666 | neutral | None | None | None | None | N |
I/F | 0.2465 | likely_benign | 0.263 | benign | -1.692 | Destabilizing | 0.457 | N | 0.68 | prob.neutral | N | 0.50578165 | None | None | N |
I/G | 0.836 | likely_pathogenic | 0.8489 | pathogenic | -3.074 | Highly Destabilizing | 0.241 | N | 0.624 | neutral | None | None | None | None | N |
I/H | 0.4769 | ambiguous | 0.5118 | ambiguous | -2.583 | Highly Destabilizing | 0.944 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/K | 0.5547 | ambiguous | 0.5793 | pathogenic | -2.247 | Highly Destabilizing | 0.388 | N | 0.671 | neutral | None | None | None | None | N |
I/L | 0.1625 | likely_benign | 0.1705 | benign | -1.385 | Destabilizing | 0.001 | N | 0.372 | neutral | N | 0.490908198 | None | None | N |
I/M | 0.1371 | likely_benign | 0.1425 | benign | -1.117 | Destabilizing | 0.627 | D | 0.699 | prob.neutral | N | 0.474002131 | None | None | N |
I/N | 0.2298 | likely_benign | 0.2483 | benign | -2.405 | Highly Destabilizing | 0.001 | N | 0.637 | neutral | N | 0.496756735 | None | None | N |
I/P | 0.9856 | likely_pathogenic | 0.9888 | pathogenic | -1.785 | Destabilizing | 0.818 | D | 0.688 | prob.neutral | None | None | None | None | N |
I/Q | 0.5348 | ambiguous | 0.5703 | pathogenic | -2.401 | Highly Destabilizing | 0.818 | D | 0.692 | prob.neutral | None | None | None | None | N |
I/R | 0.4233 | ambiguous | 0.4573 | ambiguous | -1.7 | Destabilizing | 0.69 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/S | 0.3094 | likely_benign | 0.3406 | ambiguous | -2.93 | Highly Destabilizing | 0.018 | N | 0.598 | neutral | N | 0.492657637 | None | None | N |
I/T | 0.223 | likely_benign | 0.2254 | benign | -2.682 | Highly Destabilizing | 0.193 | N | 0.643 | neutral | N | 0.497564812 | None | None | N |
I/V | 0.1041 | likely_benign | 0.1016 | benign | -1.785 | Destabilizing | 0.09 | N | 0.571 | neutral | N | 0.475901461 | None | None | N |
I/W | 0.8081 | likely_pathogenic | 0.8471 | pathogenic | -2.149 | Highly Destabilizing | 0.981 | D | 0.695 | prob.neutral | None | None | None | None | N |
I/Y | 0.4964 | ambiguous | 0.5857 | pathogenic | -1.922 | Destabilizing | 0.818 | D | 0.684 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.