Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18619 | 56080;56081;56082 | chr2:178601049;178601048;178601047 | chr2:179465776;179465775;179465774 |
N2AB | 16978 | 51157;51158;51159 | chr2:178601049;178601048;178601047 | chr2:179465776;179465775;179465774 |
N2A | 16051 | 48376;48377;48378 | chr2:178601049;178601048;178601047 | chr2:179465776;179465775;179465774 |
N2B | 9554 | 28885;28886;28887 | chr2:178601049;178601048;178601047 | chr2:179465776;179465775;179465774 |
Novex-1 | 9679 | 29260;29261;29262 | chr2:178601049;178601048;178601047 | chr2:179465776;179465775;179465774 |
Novex-2 | 9746 | 29461;29462;29463 | chr2:178601049;178601048;178601047 | chr2:179465776;179465775;179465774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1375513422 | None | 1.0 | N | 0.851 | 0.628 | 0.830745573214 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs1375513422 | None | 1.0 | N | 0.851 | 0.628 | 0.830745573214 | gnomAD-4.0.0 | 6.58077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47119E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5727 | likely_pathogenic | 0.5435 | ambiguous | -2.869 | Highly Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
L/C | 0.6712 | likely_pathogenic | 0.649 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/D | 0.9779 | likely_pathogenic | 0.9716 | pathogenic | -3.395 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/E | 0.8019 | likely_pathogenic | 0.7595 | pathogenic | -3.134 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/F | 0.3528 | ambiguous | 0.3033 | benign | -1.662 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.451637734 | None | None | N |
L/G | 0.8964 | likely_pathogenic | 0.8753 | pathogenic | -3.383 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/H | 0.5809 | likely_pathogenic | 0.5178 | ambiguous | -2.89 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | N | 0.496255303 | None | None | N |
L/I | 0.1988 | likely_benign | 0.1765 | benign | -1.324 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.480112415 | None | None | N |
L/K | 0.4778 | ambiguous | 0.4526 | ambiguous | -2.101 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/M | 0.1982 | likely_benign | 0.1804 | benign | -1.316 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
L/N | 0.838 | likely_pathogenic | 0.8212 | pathogenic | -2.588 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/P | 0.9831 | likely_pathogenic | 0.9816 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.472922039 | None | None | N |
L/Q | 0.346 | ambiguous | 0.3078 | benign | -2.372 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/R | 0.3436 | ambiguous | 0.3059 | benign | -1.902 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.373731524 | None | None | N |
L/S | 0.7493 | likely_pathogenic | 0.706 | pathogenic | -3.142 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/T | 0.6415 | likely_pathogenic | 0.6027 | pathogenic | -2.758 | Highly Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/V | 0.2062 | likely_benign | 0.181 | benign | -1.831 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.495388511 | None | None | N |
L/W | 0.6193 | likely_pathogenic | 0.5802 | pathogenic | -2.103 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/Y | 0.6748 | likely_pathogenic | 0.6502 | pathogenic | -1.923 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.