Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1861956080;56081;56082 chr2:178601049;178601048;178601047chr2:179465776;179465775;179465774
N2AB1697851157;51158;51159 chr2:178601049;178601048;178601047chr2:179465776;179465775;179465774
N2A1605148376;48377;48378 chr2:178601049;178601048;178601047chr2:179465776;179465775;179465774
N2B955428885;28886;28887 chr2:178601049;178601048;178601047chr2:179465776;179465775;179465774
Novex-1967929260;29261;29262 chr2:178601049;178601048;178601047chr2:179465776;179465775;179465774
Novex-2974629461;29462;29463 chr2:178601049;178601048;178601047chr2:179465776;179465775;179465774
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-23
  • Domain position: 41
  • Structural Position: 43
  • Q(SASA): 0.0503
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs1375513422 None 1.0 N 0.851 0.628 0.830745573214 gnomAD-3.1.2 6.58E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/P rs1375513422 None 1.0 N 0.851 0.628 0.830745573214 gnomAD-4.0.0 6.58077E-06 None None None None N None 0 0 None 0 0 None 0 0 1.47119E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.5727 likely_pathogenic 0.5435 ambiguous -2.869 Highly Destabilizing 0.999 D 0.661 neutral None None None None N
L/C 0.6712 likely_pathogenic 0.649 pathogenic -1.846 Destabilizing 1.0 D 0.755 deleterious None None None None N
L/D 0.9779 likely_pathogenic 0.9716 pathogenic -3.395 Highly Destabilizing 1.0 D 0.852 deleterious None None None None N
L/E 0.8019 likely_pathogenic 0.7595 pathogenic -3.134 Highly Destabilizing 1.0 D 0.851 deleterious None None None None N
L/F 0.3528 ambiguous 0.3033 benign -1.662 Destabilizing 1.0 D 0.683 prob.neutral N 0.451637734 None None N
L/G 0.8964 likely_pathogenic 0.8753 pathogenic -3.383 Highly Destabilizing 1.0 D 0.843 deleterious None None None None N
L/H 0.5809 likely_pathogenic 0.5178 ambiguous -2.89 Highly Destabilizing 1.0 D 0.838 deleterious N 0.496255303 None None N
L/I 0.1988 likely_benign 0.1765 benign -1.324 Destabilizing 0.999 D 0.571 neutral N 0.480112415 None None N
L/K 0.4778 ambiguous 0.4526 ambiguous -2.101 Highly Destabilizing 1.0 D 0.803 deleterious None None None None N
L/M 0.1982 likely_benign 0.1804 benign -1.316 Destabilizing 1.0 D 0.669 neutral None None None None N
L/N 0.838 likely_pathogenic 0.8212 pathogenic -2.588 Highly Destabilizing 1.0 D 0.851 deleterious None None None None N
L/P 0.9831 likely_pathogenic 0.9816 pathogenic -1.831 Destabilizing 1.0 D 0.851 deleterious N 0.472922039 None None N
L/Q 0.346 ambiguous 0.3078 benign -2.372 Highly Destabilizing 1.0 D 0.841 deleterious None None None None N
L/R 0.3436 ambiguous 0.3059 benign -1.902 Destabilizing 1.0 D 0.837 deleterious N 0.373731524 None None N
L/S 0.7493 likely_pathogenic 0.706 pathogenic -3.142 Highly Destabilizing 1.0 D 0.799 deleterious None None None None N
L/T 0.6415 likely_pathogenic 0.6027 pathogenic -2.758 Highly Destabilizing 1.0 D 0.707 prob.neutral None None None None N
L/V 0.2062 likely_benign 0.181 benign -1.831 Destabilizing 0.999 D 0.579 neutral N 0.495388511 None None N
L/W 0.6193 likely_pathogenic 0.5802 pathogenic -2.103 Highly Destabilizing 1.0 D 0.811 deleterious None None None None N
L/Y 0.6748 likely_pathogenic 0.6502 pathogenic -1.923 Destabilizing 1.0 D 0.765 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.