Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18627 | 56104;56105;56106 | chr2:178601025;178601024;178601023 | chr2:179465752;179465751;179465750 |
N2AB | 16986 | 51181;51182;51183 | chr2:178601025;178601024;178601023 | chr2:179465752;179465751;179465750 |
N2A | 16059 | 48400;48401;48402 | chr2:178601025;178601024;178601023 | chr2:179465752;179465751;179465750 |
N2B | 9562 | 28909;28910;28911 | chr2:178601025;178601024;178601023 | chr2:179465752;179465751;179465750 |
Novex-1 | 9687 | 29284;29285;29286 | chr2:178601025;178601024;178601023 | chr2:179465752;179465751;179465750 |
Novex-2 | 9754 | 29485;29486;29487 | chr2:178601025;178601024;178601023 | chr2:179465752;179465751;179465750 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs727503597 | None | 0.001 | N | 0.093 | 0.181 | 0.247872288689 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs727503597 | None | 0.001 | N | 0.093 | 0.181 | 0.247872288689 | gnomAD-4.0.0 | 1.42123E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.56654E-05 | 0 | 3.40321E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2786 | likely_benign | 0.2032 | benign | 0.013 | Stabilizing | 0.061 | N | 0.155 | neutral | None | None | None | None | N |
K/C | 0.6773 | likely_pathogenic | 0.5444 | ambiguous | -0.166 | Destabilizing | 0.983 | D | 0.183 | neutral | None | None | None | None | N |
K/D | 0.5846 | likely_pathogenic | 0.4378 | ambiguous | 0.073 | Stabilizing | 0.001 | N | 0.085 | neutral | None | None | None | None | N |
K/E | 0.1482 | likely_benign | 0.1137 | benign | 0.062 | Stabilizing | 0.001 | N | 0.045 | neutral | N | 0.388223761 | None | None | N |
K/F | 0.8143 | likely_pathogenic | 0.6667 | pathogenic | -0.312 | Destabilizing | 0.836 | D | 0.269 | neutral | None | None | None | None | N |
K/G | 0.3698 | ambiguous | 0.2543 | benign | -0.154 | Destabilizing | 0.001 | N | 0.094 | neutral | None | None | None | None | N |
K/H | 0.3883 | ambiguous | 0.2897 | benign | -0.468 | Destabilizing | 0.836 | D | 0.171 | neutral | None | None | None | None | N |
K/I | 0.3561 | ambiguous | 0.2611 | benign | 0.367 | Stabilizing | 0.264 | N | 0.293 | neutral | None | None | None | None | N |
K/L | 0.3485 | ambiguous | 0.2604 | benign | 0.367 | Stabilizing | 0.129 | N | 0.175 | neutral | None | None | None | None | N |
K/M | 0.2544 | likely_benign | 0.1983 | benign | 0.271 | Stabilizing | 0.794 | D | 0.171 | neutral | N | 0.508419311 | None | None | N |
K/N | 0.4246 | ambiguous | 0.2958 | benign | 0.292 | Stabilizing | 0.183 | N | 0.108 | neutral | N | 0.414815716 | None | None | N |
K/P | 0.4058 | ambiguous | 0.3838 | ambiguous | 0.276 | Stabilizing | 0.593 | D | 0.251 | neutral | None | None | None | None | N |
K/Q | 0.1108 | likely_benign | 0.0892 | benign | 0.083 | Stabilizing | 0.021 | N | 0.099 | neutral | N | 0.410159258 | None | None | N |
K/R | 0.0874 | likely_benign | 0.0771 | benign | 0.042 | Stabilizing | 0.183 | N | 0.145 | neutral | N | 0.443733114 | None | None | N |
K/S | 0.3879 | ambiguous | 0.2647 | benign | -0.192 | Destabilizing | 0.129 | N | 0.129 | neutral | None | None | None | None | N |
K/T | 0.1968 | likely_benign | 0.1415 | benign | -0.065 | Destabilizing | 0.001 | N | 0.093 | neutral | N | 0.451179161 | None | None | N |
K/V | 0.2849 | likely_benign | 0.2063 | benign | 0.276 | Stabilizing | 0.001 | N | 0.117 | neutral | None | None | None | None | N |
K/W | 0.807 | likely_pathogenic | 0.6883 | pathogenic | -0.334 | Destabilizing | 0.983 | D | 0.185 | neutral | None | None | None | None | N |
K/Y | 0.6805 | likely_pathogenic | 0.5414 | ambiguous | 0.04 | Stabilizing | 0.836 | D | 0.272 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.