Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1863 | 5812;5813;5814 | chr2:178776277;178776276;178776275 | chr2:179641004;179641003;179641002 |
N2AB | 1863 | 5812;5813;5814 | chr2:178776277;178776276;178776275 | chr2:179641004;179641003;179641002 |
N2A | 1863 | 5812;5813;5814 | chr2:178776277;178776276;178776275 | chr2:179641004;179641003;179641002 |
N2B | 1817 | 5674;5675;5676 | chr2:178776277;178776276;178776275 | chr2:179641004;179641003;179641002 |
Novex-1 | 1817 | 5674;5675;5676 | chr2:178776277;178776276;178776275 | chr2:179641004;179641003;179641002 |
Novex-2 | 1817 | 5674;5675;5676 | chr2:178776277;178776276;178776275 | chr2:179641004;179641003;179641002 |
Novex-3 | 1863 | 5812;5813;5814 | chr2:178776277;178776276;178776275 | chr2:179641004;179641003;179641002 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.475 | 0.325 | 0.348983352498 | gnomAD-4.0.0 | 2.05225E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 1.7986E-06 | 0 | 0 |
R/S | rs763383772 | -1.125 | 1.0 | N | 0.752 | 0.492 | 0.222439326576 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.8E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9738 | likely_pathogenic | 0.9815 | pathogenic | -0.721 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
R/C | 0.8882 | likely_pathogenic | 0.9085 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
R/D | 0.9947 | likely_pathogenic | 0.9954 | pathogenic | 0.046 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
R/E | 0.9518 | likely_pathogenic | 0.9613 | pathogenic | 0.197 | Stabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | I |
R/F | 0.9833 | likely_pathogenic | 0.9858 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
R/G | 0.9732 | likely_pathogenic | 0.9786 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.563356159 | None | None | I |
R/H | 0.6727 | likely_pathogenic | 0.7075 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
R/I | 0.9313 | likely_pathogenic | 0.9372 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
R/K | 0.5413 | ambiguous | 0.5784 | pathogenic | -0.654 | Destabilizing | 0.997 | D | 0.475 | neutral | N | 0.4845441 | None | None | I |
R/L | 0.8815 | likely_pathogenic | 0.8952 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
R/M | 0.9551 | likely_pathogenic | 0.9608 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.636336828 | None | None | I |
R/N | 0.9901 | likely_pathogenic | 0.9921 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
R/P | 0.9952 | likely_pathogenic | 0.996 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
R/Q | 0.5892 | likely_pathogenic | 0.6467 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
R/S | 0.9826 | likely_pathogenic | 0.9866 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.752 | deleterious | N | 0.509482545 | None | None | I |
R/T | 0.9635 | likely_pathogenic | 0.9717 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.504018193 | None | None | I |
R/V | 0.9393 | likely_pathogenic | 0.9466 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
R/W | 0.8795 | likely_pathogenic | 0.8901 | pathogenic | -0.05 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.636996843 | None | None | I |
R/Y | 0.9615 | likely_pathogenic | 0.9671 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.