Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18633 | 56122;56123;56124 | chr2:178601007;178601006;178601005 | chr2:179465734;179465733;179465732 |
N2AB | 16992 | 51199;51200;51201 | chr2:178601007;178601006;178601005 | chr2:179465734;179465733;179465732 |
N2A | 16065 | 48418;48419;48420 | chr2:178601007;178601006;178601005 | chr2:179465734;179465733;179465732 |
N2B | 9568 | 28927;28928;28929 | chr2:178601007;178601006;178601005 | chr2:179465734;179465733;179465732 |
Novex-1 | 9693 | 29302;29303;29304 | chr2:178601007;178601006;178601005 | chr2:179465734;179465733;179465732 |
Novex-2 | 9760 | 29503;29504;29505 | chr2:178601007;178601006;178601005 | chr2:179465734;179465733;179465732 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.999 | N | 0.691 | 0.226 | 0.250039746154 | gnomAD-4.0.0 | 6.84467E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99753E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2646 | likely_benign | 0.2682 | benign | -0.471 | Destabilizing | 0.997 | D | 0.548 | neutral | None | None | None | None | I |
Q/C | 0.7755 | likely_pathogenic | 0.8226 | pathogenic | 0.148 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
Q/D | 0.7053 | likely_pathogenic | 0.7792 | pathogenic | -0.4 | Destabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | I |
Q/E | 0.1429 | likely_benign | 0.1619 | benign | -0.371 | Destabilizing | 0.992 | D | 0.379 | neutral | N | 0.453387173 | None | None | I |
Q/F | 0.7952 | likely_pathogenic | 0.8443 | pathogenic | -0.394 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | I |
Q/G | 0.4943 | ambiguous | 0.5394 | ambiguous | -0.76 | Destabilizing | 0.997 | D | 0.647 | neutral | None | None | None | None | I |
Q/H | 0.4517 | ambiguous | 0.5244 | ambiguous | -0.742 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.502490629 | None | None | I |
Q/I | 0.3497 | ambiguous | 0.4072 | ambiguous | 0.229 | Stabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
Q/K | 0.1616 | likely_benign | 0.2015 | benign | -0.255 | Destabilizing | 0.997 | D | 0.468 | neutral | N | 0.44733078 | None | None | I |
Q/L | 0.174 | likely_benign | 0.2098 | benign | 0.229 | Stabilizing | 0.997 | D | 0.647 | neutral | N | 0.466148614 | None | None | I |
Q/M | 0.4071 | ambiguous | 0.4312 | ambiguous | 0.727 | Stabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | I |
Q/N | 0.4627 | ambiguous | 0.5328 | ambiguous | -0.668 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | I |
Q/P | 0.1217 | likely_benign | 0.1325 | benign | 0.027 | Stabilizing | 0.999 | D | 0.78 | deleterious | N | 0.444349189 | None | None | I |
Q/R | 0.1708 | likely_benign | 0.2095 | benign | -0.128 | Destabilizing | 0.997 | D | 0.509 | neutral | N | 0.438807297 | None | None | I |
Q/S | 0.3981 | ambiguous | 0.429 | ambiguous | -0.7 | Destabilizing | 0.997 | D | 0.487 | neutral | None | None | None | None | I |
Q/T | 0.2727 | likely_benign | 0.3193 | benign | -0.496 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
Q/V | 0.2425 | likely_benign | 0.2853 | benign | 0.027 | Stabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | I |
Q/W | 0.7721 | likely_pathogenic | 0.8462 | pathogenic | -0.304 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
Q/Y | 0.6816 | likely_pathogenic | 0.7641 | pathogenic | -0.086 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.