Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18634 | 56125;56126;56127 | chr2:178601004;178601003;178601002 | chr2:179465731;179465730;179465729 |
N2AB | 16993 | 51202;51203;51204 | chr2:178601004;178601003;178601002 | chr2:179465731;179465730;179465729 |
N2A | 16066 | 48421;48422;48423 | chr2:178601004;178601003;178601002 | chr2:179465731;179465730;179465729 |
N2B | 9569 | 28930;28931;28932 | chr2:178601004;178601003;178601002 | chr2:179465731;179465730;179465729 |
Novex-1 | 9694 | 29305;29306;29307 | chr2:178601004;178601003;178601002 | chr2:179465731;179465730;179465729 |
Novex-2 | 9761 | 29506;29507;29508 | chr2:178601004;178601003;178601002 | chr2:179465731;179465730;179465729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs2154192588 | None | 0.999 | N | 0.764 | 0.519 | 0.818176495643 | gnomAD-4.0.0 | 3.18529E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72213E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7153 | likely_pathogenic | 0.6724 | pathogenic | -1.999 | Destabilizing | 0.964 | D | 0.468 | neutral | None | None | None | None | I |
C/D | 0.9862 | likely_pathogenic | 0.9814 | pathogenic | -0.661 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | I |
C/E | 0.9858 | likely_pathogenic | 0.9804 | pathogenic | -0.52 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
C/F | 0.6549 | likely_pathogenic | 0.6093 | pathogenic | -1.289 | Destabilizing | 0.997 | D | 0.724 | prob.delet. | N | 0.508203093 | None | None | I |
C/G | 0.6748 | likely_pathogenic | 0.5924 | pathogenic | -2.337 | Highly Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.482761089 | None | None | I |
C/H | 0.915 | likely_pathogenic | 0.8901 | pathogenic | -2.292 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
C/I | 0.7549 | likely_pathogenic | 0.73 | pathogenic | -1.108 | Destabilizing | 0.971 | D | 0.498 | neutral | None | None | None | None | I |
C/K | 0.9753 | likely_pathogenic | 0.9638 | pathogenic | -1.214 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
C/L | 0.768 | likely_pathogenic | 0.742 | pathogenic | -1.108 | Destabilizing | 0.931 | D | 0.516 | neutral | None | None | None | None | I |
C/M | 0.8654 | likely_pathogenic | 0.8434 | pathogenic | 0.039 | Stabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
C/N | 0.933 | likely_pathogenic | 0.914 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | I |
C/P | 0.9903 | likely_pathogenic | 0.9873 | pathogenic | -1.38 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | I |
C/Q | 0.9464 | likely_pathogenic | 0.9223 | pathogenic | -1.155 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
C/R | 0.8797 | likely_pathogenic | 0.8244 | pathogenic | -1.153 | Destabilizing | 0.999 | D | 0.764 | deleterious | N | 0.507484708 | None | None | I |
C/S | 0.7921 | likely_pathogenic | 0.7451 | pathogenic | -1.894 | Destabilizing | 0.99 | D | 0.595 | neutral | N | 0.470226241 | None | None | I |
C/T | 0.8443 | likely_pathogenic | 0.8258 | pathogenic | -1.559 | Destabilizing | 0.985 | D | 0.555 | neutral | None | None | None | None | I |
C/V | 0.6216 | likely_pathogenic | 0.608 | pathogenic | -1.38 | Destabilizing | 0.469 | N | 0.342 | neutral | None | None | None | None | I |
C/W | 0.8938 | likely_pathogenic | 0.8626 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.510273093 | None | None | I |
C/Y | 0.7545 | likely_pathogenic | 0.7109 | pathogenic | -1.318 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.474518655 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.