Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18635 | 56128;56129;56130 | chr2:178601001;178601000;178600999 | chr2:179465728;179465727;179465726 |
N2AB | 16994 | 51205;51206;51207 | chr2:178601001;178601000;178600999 | chr2:179465728;179465727;179465726 |
N2A | 16067 | 48424;48425;48426 | chr2:178601001;178601000;178600999 | chr2:179465728;179465727;179465726 |
N2B | 9570 | 28933;28934;28935 | chr2:178601001;178601000;178600999 | chr2:179465728;179465727;179465726 |
Novex-1 | 9695 | 29308;29309;29310 | chr2:178601001;178601000;178600999 | chr2:179465728;179465727;179465726 |
Novex-2 | 9762 | 29509;29510;29511 | chr2:178601001;178601000;178600999 | chr2:179465728;179465727;179465726 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 1.0 | N | 0.733 | 0.354 | 0.165133752707 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | None | None | 0.999 | N | 0.587 | 0.273 | 0.231231049324 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8036 | likely_pathogenic | 0.8305 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
N/C | 0.6424 | likely_pathogenic | 0.633 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
N/D | 0.7982 | likely_pathogenic | 0.836 | pathogenic | -0.521 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.514075847 | None | None | N |
N/E | 0.9627 | likely_pathogenic | 0.9716 | pathogenic | -0.384 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
N/F | 0.975 | likely_pathogenic | 0.9838 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
N/G | 0.7338 | likely_pathogenic | 0.7586 | pathogenic | -1.337 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
N/H | 0.6074 | likely_pathogenic | 0.6763 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.497164954 | None | None | N |
N/I | 0.8727 | likely_pathogenic | 0.9129 | pathogenic | -0.004 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.474459884 | None | None | N |
N/K | 0.9721 | likely_pathogenic | 0.9832 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.468850797 | None | None | N |
N/L | 0.8467 | likely_pathogenic | 0.8801 | pathogenic | -0.004 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/M | 0.9026 | likely_pathogenic | 0.9227 | pathogenic | 0.366 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/P | 0.9234 | likely_pathogenic | 0.946 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/Q | 0.915 | likely_pathogenic | 0.9325 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
N/R | 0.952 | likely_pathogenic | 0.9675 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
N/S | 0.1809 | likely_benign | 0.162 | benign | -0.95 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.499951756 | None | None | N |
N/T | 0.526 | ambiguous | 0.5776 | pathogenic | -0.6 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.495391298 | None | None | N |
N/V | 0.8061 | likely_pathogenic | 0.8532 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/W | 0.9893 | likely_pathogenic | 0.9919 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
N/Y | 0.8673 | likely_pathogenic | 0.9043 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.496068876 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.