Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1864 | 5815;5816;5817 | chr2:178776274;178776273;178776272 | chr2:179641001;179641000;179640999 |
N2AB | 1864 | 5815;5816;5817 | chr2:178776274;178776273;178776272 | chr2:179641001;179641000;179640999 |
N2A | 1864 | 5815;5816;5817 | chr2:178776274;178776273;178776272 | chr2:179641001;179641000;179640999 |
N2B | 1818 | 5677;5678;5679 | chr2:178776274;178776273;178776272 | chr2:179641001;179641000;179640999 |
Novex-1 | 1818 | 5677;5678;5679 | chr2:178776274;178776273;178776272 | chr2:179641001;179641000;179640999 |
Novex-2 | 1818 | 5677;5678;5679 | chr2:178776274;178776273;178776272 | chr2:179641001;179641000;179640999 |
Novex-3 | 1864 | 5815;5816;5817 | chr2:178776274;178776273;178776272 | chr2:179641001;179641000;179640999 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2092215067 | None | 0.997 | N | 0.535 | 0.375 | 0.638969403159 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.891 | likely_pathogenic | 0.8833 | pathogenic | -1.96 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.492029847 | None | None | I |
V/C | 0.9759 | likely_pathogenic | 0.9773 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
V/D | 0.9987 | likely_pathogenic | 0.9991 | pathogenic | -2.796 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
V/E | 0.9945 | likely_pathogenic | 0.9961 | pathogenic | -2.667 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.671409924 | None | None | I |
V/F | 0.9199 | likely_pathogenic | 0.9396 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
V/G | 0.9631 | likely_pathogenic | 0.966 | pathogenic | -2.393 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.65277814 | None | None | I |
V/H | 0.9986 | likely_pathogenic | 0.9991 | pathogenic | -2.221 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
V/I | 0.1352 | likely_benign | 0.1495 | benign | -0.775 | Destabilizing | 0.997 | D | 0.535 | neutral | N | 0.50228917 | None | None | I |
V/K | 0.9972 | likely_pathogenic | 0.998 | pathogenic | -1.668 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
V/L | 0.7748 | likely_pathogenic | 0.8257 | pathogenic | -0.775 | Destabilizing | 0.997 | D | 0.628 | neutral | D | 0.598212504 | None | None | I |
V/M | 0.7965 | likely_pathogenic | 0.8433 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
V/N | 0.9957 | likely_pathogenic | 0.9966 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
V/P | 0.9958 | likely_pathogenic | 0.9964 | pathogenic | -1.144 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
V/Q | 0.9949 | likely_pathogenic | 0.9963 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
V/R | 0.9957 | likely_pathogenic | 0.9967 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
V/S | 0.9767 | likely_pathogenic | 0.9785 | pathogenic | -2.221 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
V/T | 0.9128 | likely_pathogenic | 0.9199 | pathogenic | -1.991 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
V/W | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -1.742 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
V/Y | 0.9949 | likely_pathogenic | 0.9962 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.