Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18641 | 56146;56147;56148 | chr2:178600983;178600982;178600981 | chr2:179465710;179465709;179465708 |
N2AB | 17000 | 51223;51224;51225 | chr2:178600983;178600982;178600981 | chr2:179465710;179465709;179465708 |
N2A | 16073 | 48442;48443;48444 | chr2:178600983;178600982;178600981 | chr2:179465710;179465709;179465708 |
N2B | 9576 | 28951;28952;28953 | chr2:178600983;178600982;178600981 | chr2:179465710;179465709;179465708 |
Novex-1 | 9701 | 29326;29327;29328 | chr2:178600983;178600982;178600981 | chr2:179465710;179465709;179465708 |
Novex-2 | 9768 | 29527;29528;29529 | chr2:178600983;178600982;178600981 | chr2:179465710;179465709;179465708 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.581 | N | 0.577 | 0.182 | 0.284539287134 | gnomAD-4.0.0 | 6.84482E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15982E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1383 | likely_benign | 0.1203 | benign | -0.232 | Destabilizing | 0.581 | D | 0.649 | neutral | N | 0.474344022 | None | None | N |
E/C | 0.8114 | likely_pathogenic | 0.7444 | pathogenic | -0.384 | Destabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/D | 0.0953 | likely_benign | 0.0776 | benign | -0.758 | Destabilizing | 0.004 | N | 0.204 | neutral | N | 0.45648898 | None | None | N |
E/F | 0.6948 | likely_pathogenic | 0.6178 | pathogenic | 0.409 | Stabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/G | 0.127 | likely_benign | 0.1042 | benign | -0.542 | Destabilizing | 0.83 | D | 0.663 | neutral | N | 0.458259849 | None | None | N |
E/H | 0.4618 | ambiguous | 0.3941 | ambiguous | 0.641 | Stabilizing | 0.98 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/I | 0.3687 | ambiguous | 0.3107 | benign | 0.591 | Stabilizing | 0.929 | D | 0.765 | deleterious | None | None | None | None | N |
E/K | 0.1907 | likely_benign | 0.1704 | benign | 0.067 | Stabilizing | 0.581 | D | 0.577 | neutral | N | 0.477229612 | None | None | N |
E/L | 0.4065 | ambiguous | 0.3237 | benign | 0.591 | Stabilizing | 0.866 | D | 0.761 | deleterious | None | None | None | None | N |
E/M | 0.4391 | ambiguous | 0.3652 | ambiguous | 0.483 | Stabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/N | 0.1622 | likely_benign | 0.1269 | benign | -0.644 | Destabilizing | 0.764 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/P | 0.712 | likely_pathogenic | 0.6859 | pathogenic | 0.339 | Stabilizing | 0.929 | D | 0.77 | deleterious | None | None | None | None | N |
E/Q | 0.1743 | likely_benign | 0.1475 | benign | -0.495 | Destabilizing | 0.83 | D | 0.633 | neutral | N | 0.469399563 | None | None | N |
E/R | 0.3203 | likely_benign | 0.2928 | benign | 0.486 | Stabilizing | 0.866 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/S | 0.17 | likely_benign | 0.1407 | benign | -0.806 | Destabilizing | 0.48 | N | 0.615 | neutral | None | None | None | None | N |
E/T | 0.1799 | likely_benign | 0.1464 | benign | -0.53 | Destabilizing | 0.866 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/V | 0.2163 | likely_benign | 0.1843 | benign | 0.339 | Stabilizing | 0.908 | D | 0.744 | deleterious | N | 0.475402815 | None | None | N |
E/W | 0.8979 | likely_pathogenic | 0.8532 | pathogenic | 0.64 | Stabilizing | 0.993 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/Y | 0.5464 | ambiguous | 0.4638 | ambiguous | 0.681 | Stabilizing | 0.993 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.