Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18646 | 56161;56162;56163 | chr2:178600968;178600967;178600966 | chr2:179465695;179465694;179465693 |
N2AB | 17005 | 51238;51239;51240 | chr2:178600968;178600967;178600966 | chr2:179465695;179465694;179465693 |
N2A | 16078 | 48457;48458;48459 | chr2:178600968;178600967;178600966 | chr2:179465695;179465694;179465693 |
N2B | 9581 | 28966;28967;28968 | chr2:178600968;178600967;178600966 | chr2:179465695;179465694;179465693 |
Novex-1 | 9706 | 29341;29342;29343 | chr2:178600968;178600967;178600966 | chr2:179465695;179465694;179465693 |
Novex-2 | 9773 | 29542;29543;29544 | chr2:178600968;178600967;178600966 | chr2:179465695;179465694;179465693 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2053262199 | None | 0.014 | N | 0.383 | 0.231 | 0.47185959272 | gnomAD-4.0.0 | 3.4224E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49888E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3013 | likely_benign | 0.2405 | benign | -1.781 | Destabilizing | 0.014 | N | 0.383 | neutral | N | 0.477176271 | None | None | N |
V/C | 0.8718 | likely_pathogenic | 0.8649 | pathogenic | -1.348 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/D | 0.9802 | likely_pathogenic | 0.977 | pathogenic | -2.248 | Highly Destabilizing | 0.971 | D | 0.837 | deleterious | N | 0.494457606 | None | None | N |
V/E | 0.9453 | likely_pathogenic | 0.9368 | pathogenic | -1.999 | Destabilizing | 0.956 | D | 0.804 | deleterious | None | None | None | None | N |
V/F | 0.7316 | likely_pathogenic | 0.7015 | pathogenic | -1.021 | Destabilizing | 0.971 | D | 0.725 | prob.delet. | N | 0.499809522 | None | None | N |
V/G | 0.7698 | likely_pathogenic | 0.7462 | pathogenic | -2.351 | Highly Destabilizing | 0.89 | D | 0.795 | deleterious | N | 0.52171612 | None | None | N |
V/H | 0.9833 | likely_pathogenic | 0.98 | pathogenic | -2.155 | Highly Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | N |
V/I | 0.1084 | likely_benign | 0.0975 | benign | -0.184 | Destabilizing | 0.058 | N | 0.286 | neutral | N | 0.47444281 | None | None | N |
V/K | 0.9469 | likely_pathogenic | 0.9463 | pathogenic | -1.43 | Destabilizing | 0.956 | D | 0.806 | deleterious | None | None | None | None | N |
V/L | 0.5288 | ambiguous | 0.5079 | ambiguous | -0.184 | Destabilizing | 0.489 | N | 0.617 | neutral | N | 0.510840753 | None | None | N |
V/M | 0.4218 | ambiguous | 0.3754 | ambiguous | -0.294 | Destabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/N | 0.9518 | likely_pathogenic | 0.9376 | pathogenic | -1.817 | Destabilizing | 0.978 | D | 0.835 | deleterious | None | None | None | None | N |
V/P | 0.9504 | likely_pathogenic | 0.9427 | pathogenic | -0.688 | Destabilizing | 0.978 | D | 0.806 | deleterious | None | None | None | None | N |
V/Q | 0.9349 | likely_pathogenic | 0.9232 | pathogenic | -1.589 | Destabilizing | 0.978 | D | 0.819 | deleterious | None | None | None | None | N |
V/R | 0.9194 | likely_pathogenic | 0.9194 | pathogenic | -1.435 | Destabilizing | 0.956 | D | 0.83 | deleterious | None | None | None | None | N |
V/S | 0.7593 | likely_pathogenic | 0.7059 | pathogenic | -2.463 | Highly Destabilizing | 0.915 | D | 0.78 | deleterious | None | None | None | None | N |
V/T | 0.5125 | ambiguous | 0.4554 | ambiguous | -2.048 | Highly Destabilizing | 0.86 | D | 0.654 | neutral | None | None | None | None | N |
V/W | 0.9915 | likely_pathogenic | 0.9899 | pathogenic | -1.537 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
V/Y | 0.9645 | likely_pathogenic | 0.961 | pathogenic | -1.088 | Destabilizing | 0.993 | D | 0.714 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.